Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso4g0304 ATGAAATTCAAGTCAAGAAGATTAGAAGCAGAAGCAGGAGCACTGGTCTTATTCTTTCTCATTTTGTCATCGTCATCTTCTTCCAATTACGCCAAACCAAGCACCATCATTCATCAATTCAAGGAAGCCCCCGAATTCTACAACTCCCCAGAATGCGCCTCCCTCACCCACAGCAGCGACAGCTACATATGTTCGGAGGAAGCGGTACACGTGGCAATGACGCTGGACACTACATACATCCGAGGATCCATGGCGGCGATCCTCTCGGTCATCCAACACTCGTCGTGCCCGCAGAACACATTCTTCCACTTCGTCTGCTCCTCTAGCGCGTCCCTCCTACGCGCCGCGATCTCCCACTCATTCCCTTACCTCAACTTCCACCTCTACACCTTCGACGACTCCCAGGTCTCGGGCCTCATCTCCACCTCAATCCGCTCCGCACTGGATTGCCCCTTAAACTACGCGCGCTCCTACTTGCCCAGCCTCCTACCCCTCTGCGTGCGGCGCGTGGTGTACCTGGACTCCGACCTAATCCTCGTCGACGACATTGCCAAGCTGGCAGCCACACTACTAGGCGAAAACACGGTCCTGGCAGCCCCCGAATACTGCAACGCCAACTTCACCTCGTACTTCACCCCAACGTTCTGGTCCAACCCTTCGCTGTCTCTCACGTTCGCGGATAGGAGGCCGTGCTACTTCAACACGGGGGTTATGGTCATCGATTTGGAGCGGTGGCGGGAGGGGGATTACACCACCAAAATCGAGGAGTGGATGGAGCTGCAGAAGAGGATGAGAATCTATGACTTGGGTTCTCTGCCGCCGTTTTTGCTTGTCTTTGCTGGGAATATTGCTTCCGTGGATCATAGGTGGAACCAGCACGGCCTCGGTGGTGATAATTTTCGTGGCCTTTGCAGAGATCTGCACCCTGGTCCTGTTAGTCTCTTGCATTGGAGTGGGAAAGATTCGTACAGATCTGAAGTGAACACAAGGCAACGCAGATTCAAACGGGGAGGAAAGAAAAAGGTGAACTGA 1032 0.5378 MKFKSRRLEAEAGALVLFFLILSSSSSSNYAKPSTIIHQFKEAPEFYNSPECASLTHSSDSYICSEEAVHVAMTLDTTYIRGSMAAILSVIQHSSCPQNTFFHFVCSSSASLLRAAISHSFPYLNFHLYTFDDSQVSGLISTSIRSALDCPLNYARSYLPSLLPLCVRRVVYLDSDLILVDDIAKLAATLLGENTVLAAPEYCNANFTSYFTPTFWSNPSLSLTFADRRPCYFNTGVMVIDLERWREGDYTTKIEEWMELQKRMRIYDLGSLPPFLLVFAGNIASVDHRWNQHGLGGDNFRGLCRDLHPGPVSLLHWSGKDSYRSEVNTRQRRFKRGGKKKVN* 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso4g0304 343 SUPERFAMILY Nucleotide-diphospho-sugar transferases 69 320 IPR029044 -
Gso4g0304 343 PANTHER HEXOSYLTRANSFERASE 6 321 - -
Gso4g0304 343 PANTHER GLYCOSYLTRANSFERASE 8 DOMAIN-CONTAINING PROTEIN 6 321 - -
Gso4g0304 343 Pfam Glycosyl transferase family 8 70 320 IPR002495 GO:0016757
Gso4g0304 343 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 70 337 IPR029044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso4g0304 Gso-Chr4 2748197 2749876 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso4g0304 38 320 Glycosyltransferase AT3G50760 72.727 3.61e-158 444
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso4g0304 K20893 - gmx:100802240 625.55
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g0304 4 2748197 2749876 Gso4g0304 4 2748197 2749876 ECH
Gso4g0304 4 2748197 2749876 Gso6g0286 6 2680518 2682340 GST
Gso14g0658 14 6547740 6549559 Gso4g0304 4 2748197 2749876 PCT
Gso17g2097 17 40683920 40685658 Gso4g0304 4 2748197 2749876 PCT
Gso4g0304 4 2748197 2749876 Gso14g0658 14 6547740 6549559 PCT
Gso4g0304 4 2748197 2749876 Gso17g2097 17 40683920 40685658 PCT