Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso4g0291 ATGGCCAAACGCTTCAAATTGAAGTTCAATATCCCTTCATTTCAAATGTGTCGCTCAAAAGACCCTTCCTCTTTCCCTGGAAATCCCGTTCCTGCCATATACCGTCTTTCTCCCGTTAACCACAACGCGCGTCACACGAGACATCCAAGCATTCCTTCTCCGTCACCGTCAAAGATAACGTCCATCGCGCAGGGATGCAAAATGTGCCATGACAAGCAGAGTTTGAAGAAACTGAAATCCATCAGAGGCCGGAAAAGCACGTCCAGCGTTCCGTCGAGGCGAAGCGATTTTCGAATCGACAACATCGAGGAAGAGGAGAGCGAGACTCTGATTTCTTGCATGACAAGTTTCTCCGACGAGTTTTGTCTCGGCGAGGAGAAGGAGCTAAGTACTGGTAGTAGCAGCCAGAGAAGGAAGATGAGCAGCGTAAAGAAGGTTCGGAGTGTGAGGTTTCAGAGTTCGGAGAAACGGAGAGGAGCGGAGGTGAAGAAGACGACGGTGACACGGAAAAGTGTGGAGGGGAAGGTGAGGGAGAGTTTTGCGGTAGTGAAGAAGTCAAAGGATCCTTATGAAGACTTCAAGAAATCGATGATGGAGATGATAACGGAGATGGAGATGTCTGAGGCCGAAGATTTGGAGCAGCTTTTGCAGTGTTTCTTGGCTTTGAACTCTCGGAGTCATCATGCAGTTATTGTGCGGGCTTTCATGGAGATTTGGCAACAAATGTTCTTTTGGAACCCTACGTCAATGAAAAATCTCCAAACAGATCTGGAAAAGTAA 780 0.4769 MAKRFKLKFNIPSFQMCRSKDPSSFPGNPVPAIYRLSPVNHNARHTRHPSIPSPSPSKITSIAQGCKMCHDKQSLKKLKSIRGRKSTSSVPSRRSDFRIDNIEEEESETLISCMTSFSDEFCLGEEKELSTGSSSQRRKMSSVKKVRSVRFQSSEKRRGAEVKKTTVTRKSVEGKVRESFAVVKKSKDPYEDFKKSMMEMITEMEMSEAEDLEQLLQCFLALNSRSHHAVIVRAFMEIWQQMFFWNPTSMKNLQTDLEK* 260
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso4g0291 259 Pfam Transcriptional repressor, ovate 186 243 IPR006458 -
Gso4g0291 259 MobiDBLite consensus disorder prediction 128 147 - -
Gso4g0291 259 ProSiteProfiles OVATE domain profile. 182 241 IPR006458 -
Gso4g0291 259 PANTHER TRANSCRIPTION REPRESSOR OFP7 1 63 - -
Gso4g0291 259 PANTHER TRANSCRIPTION REPRESSOR OFP7 69 251 - -
Gso4g0291 259 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 69 251 IPR038933 GO:0045892
Gso4g0291 259 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 1 63 IPR038933 GO:0045892
Gso4g0291 259 TIGRFAM A_thal_3678: uncharacterized plant-specific domain TIGR01568 180 242 IPR006458 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso4g0291 Gso-Chr4 2610397 2611176 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Gso4g0291 Ovate 5.8e-25 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso4g0291 - - gmx:102662518 481.87
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g0291 4 2610397 2611176 Gso4g0291 4 2610397 2611176 ECH
Gso4g0291 4 2610397 2611176 Gso6g0270 6 2540097 2540855 GST