Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso4g0278 ATGGCATACAAGTACGAGAATTATGACCCCTCCTTCCCCGACCAACCCGTGGTTGACTTATACCTCCCAGTTTGGGCCAGGTTAGCAGCCTTGAAGTCCAAGCCAGCCTTCATTTGGGCTCAAGACTTGTCCACCTCCACTCTTCTCACCTACCAACAACTTAATTCCACCGTTGATGTCATCTCCTCTCGGCTACTCTCTCCTCCATTACAAAAAAGAGGTGACACTGTCCTTCTTCTCTGCTCTCCAGGACTTGACCTAGTTGAGCTCATCTTCGCGTGCCAAAGAGCTGGTCTTTTGAGCGTCCCCATCATCCCTCCTCACCCTGCCTTCGCTAAAGAAAACTATCACCATCTCATACGAGCCATTTCACAGACCAAGCCCAAAGCCGCCATCGCTCACCCTCACTACATATCAAGCATTCGACACTACGTGTCTTCTCCACATAACAACAACAAACTTACTCACATGTTGCAAAGCATCCACTGGATCTCCATTGACGAACTCAAACATGGACGTCAAGGTAATAATAACATGGTTACTTTAAATAATCTTGATTACCGTGGTTGCAAAGCAGATGAGGTTTACTTGGTTCAGTACACGTCTGGTGCCACTGGGGTTCCAAAACCCGTGCTTGTCACAGCGGGTTCAGCCGCTCACAACGTTAGAACAGCGAGAAGAGCTTACGATCTTCATCCCAACAGCACAATCGTTTCGTGGCTTCCACAGTACCATGACTGTGGTCTCATGTTTCTGTTGCTCACCGTTGTATCTGGCGCTACTTGTGTTCTCACTTCCCCAACCGCGTTCATCAAGCGCCCCAGACTCTGGCTTGAACTCTTGTCGGAATTCAAGGCCACGTGCACTCCCGTTCCCTCCTTCACATTGCCGCTCGTCATCAAGCGTGGAGGAGTTCACCAGGGAGCTTCACCCCTCAACCTTTCAACTCTGAAAAACCTCATAATCATCAACGAACCCATCTATAGAGACTCAGTGGAAGAATTTTTTCACACTTTTTCTCCATTTGGGTTAAGCCCTTCTTCTATTTCTCCTTCCTATGGGTTAGCAGAGAATTGCACCTTTGTGTCCACTGCGTGGAGGAGCGTTAATAGTGACAACGATGGTGTCGGTGCTGGTGCCAATTCTTCAAGCTTCCCAGATTTTCCAGCTCACAACAAACTCTTACCGGTTGCAAGGCTCGGAAACGTGGAAGAGGAAGACGTGGAAATCATGGTTGTTAAGGAAGAAACGTTGGAGCCAGCTGAAGATGGTGTTGAAGGAGAAATTTGGGTTGCTTCCCCAAGCAACGCTTCTGGGTACCTTGGCCACCCTTGTTTTACAAGAGAAGTGTTTCATGGAAGACTAAGAAACGTGGTTAGTAAGTGCTTTCTTCGAACTGGGGACAGAGGCATAGTGAAAGGAGAAAAAAGATATCTTTTTGTCACTGGTCGCTGTCAAGACGTTATGGAACTCCGAAACGGTCAAAAGGTTCATCCACATTACATAGAGACTGCGGCTTATAATAGTTGCACGAAGTTACTCAGAGGTGGTTGCCTTGCTGCGTTTAAAGTTTCATCAATGGTGGCGGTTGTGGCAGAGATGCAGAGGATCAAAAAGGGTATTGAAAAGGGTGTGTTGAAGAGAATTTGTGAGGGAATTAAGGAAGCTGTTTGGGAGAATGAGAAGGTGGAGGTTGGATGGGTGGTTTTGGTTGAGAGTGAGAGTGTTCCGAAAACCACTTCTGGGAAATTGCAAAGAGGGAAGGCTAAGGAGAAGCTTCTTGCAGGGGGAATGAAGATTCTGATGGAGATGCAGTTTGGAAAAGATGTTTCTGTTTCTAAGATAGCACAGACGAAGGTAAGACAAGTGGCTTGGGAAGAAAACGTAACTGGTTCACTTTTATGTGTAGAAGCTCATAGCACATTAATGTCACTTCTATGA 1941 0.4683 MAYKYENYDPSFPDQPVVDLYLPVWARLAALKSKPAFIWAQDLSTSTLLTYQQLNSTVDVISSRLLSPPLQKRGDTVLLLCSPGLDLVELIFACQRAGLLSVPIIPPHPAFAKENYHHLIRAISQTKPKAAIAHPHYISSIRHYVSSPHNNNKLTHMLQSIHWISIDELKHGRQGNNNMVTLNNLDYRGCKADEVYLVQYTSGATGVPKPVLVTAGSAAHNVRTARRAYDLHPNSTIVSWLPQYHDCGLMFLLLTVVSGATCVLTSPTAFIKRPRLWLELLSEFKATCTPVPSFTLPLVIKRGGVHQGASPLNLSTLKNLIIINEPIYRDSVEEFFHTFSPFGLSPSSISPSYGLAENCTFVSTAWRSVNSDNDGVGAGANSSSFPDFPAHNKLLPVARLGNVEEEDVEIMVVKEETLEPAEDGVEGEIWVASPSNASGYLGHPCFTREVFHGRLRNVVSKCFLRTGDRGIVKGEKRYLFVTGRCQDVMELRNGQKVHPHYIETAAYNSCTKLLRGGCLAAFKVSSMVAVVAEMQRIKKGIEKGVLKRICEGIKEAVWENEKVEVGWVVLVESESVPKTTSGKLQRGKAKEKLLAGGMKILMEMQFGKDVSVSKIAQTKVRQVAWEENVTGSLLCVEAHSTLMSLL* 647
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso4g0278 646 Gene3D - 7 485 IPR042099 -
Gso4g0278 646 PANTHER DISCO-INTERACTING PROTEIN 2 DIP2 -RELATED 6 615 - -
Gso4g0278 646 Pfam AMP-binding enzyme 31 492 IPR000873 -
Gso4g0278 646 CDD FAAL 27 595 IPR040097 GO:0008610
Gso4g0278 646 Gene3D - 489 608 IPR045851 -
Gso4g0278 646 SUPERFAMILY Acetyl-CoA synthetase-like 23 595 - -
Gso4g0278 646 PANTHER 10A19I.5 6 615 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso4g0278 Gso-Chr4 2508759 2510699 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso4g0278 190 593 Monolignol Biosynthesis Gene Families AT4G19010 25.236 4.31e-10 60.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso4g0278 - - gmx:102662250 1298.88
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g0278 4 2508759 2510699 Gso6g0258 6 2439322 2441217 GST