Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso4g0260 ATGTCCATGTCCATGGCCTCATCAAGTGGAAACTCCTCTATTAGCACAAAATCTCAGAGCTCAGGGTCTGAGGGTGATTTGCAGGTCGTGATAACAGACGAGAGGAAGAACAAGAGGAAGCAATCGAATCGTGAATCGGCGAGAAGATCTCGGATGCGAAAGCGTAACCACTTGGACCAACTCACTAAGCAGCTCTCACAGCTCGCAAAGAACAACGGCGAAATCCTCGCCACCATAGACATCACCACGCAGCACTATCTGAACGTTGAGGCAGAGAATTCCATTCTAAGGGCCCAAATGGGTGAGCTTAGCCAACGGCTCCAATCGCTCAACGACATCGTCCACGACATCATCATCAACACAACCACCACCTACGAAAGGGACTGTTATCTAACAAGCGCACAAAATTTCACCACCACCACCAACACGCTCTGTCTTAACCAACCCGTTTTTCAGTGGTGA 462 0.4935 MSMSMASSSGNSSISTKSQSSGSEGDLQVVITDERKNKRKQSNRESARRSRMRKRNHLDQLTKQLSQLAKNNGEILATIDITTQHYLNVEAENSILRAQMGELSQRLQSLNDIVHDIIINTTTTYERDCYLTSAQNFTTTTNTLCLNQPVFQW* 154
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso4g0260 153 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 38 53 IPR004827 GO:0003700|GO:0006355
Gso4g0260 153 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 33 96 IPR004827 GO:0003700|GO:0006355
Gso4g0260 153 CDD bZIP_plant_GBF1 36 86 IPR045314 GO:0003700|GO:0006355
Gso4g0260 153 Pfam bZIP transcription factor 35 86 IPR004827 GO:0003700|GO:0006355
Gso4g0260 153 SMART brlzneu 31 95 IPR004827 GO:0003700|GO:0006355
Gso4g0260 153 MobiDBLite consensus disorder prediction 1 58 - -
Gso4g0260 153 PANTHER BZIP TRANSCRIPTION FACTOR 5 151 - -
Gso4g0260 153 MobiDBLite consensus disorder prediction 1 27 - -
Gso4g0260 153 SUPERFAMILY Leucine zipper domain 35 88 IPR046347 GO:0003700|GO:0006355
Gso4g0260 153 MobiDBLite consensus disorder prediction 42 56 - -
Gso4g0260 153 PANTHER BZIP TRANSCRIPTION FACTOR 44 5 151 - -
Gso4g0260 153 Coils Coil 44 78 - -
Gso4g0260 153 Gene3D - 31 111 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso4g0260 Gso-Chr4 2381698 2382905 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso4g0260 6 99 bZIP Transcription Factor Family AT1G75390 63.918 1.46e-32 110
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Gso4g0260 bZIP_1 9.7e-09 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso4g0260 K25786 - gmx:778188 246.128
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g0260 4 2381698 2382905 Gso6g0239 6 2305747 2307065 GST