Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso4g0233 ATGACACTCCTCCTCCTCCTTATTCTCCTCTTTCACGCGGCGGAAGCCAAGGGACAGTGGCAGCTCCTCCACAAAAACATCGGCATTGTCGCCATGCACATGCAGCTTCTCCACAACGACCGCGTCATCATCTTCGACCGCACCGACTTCGGACTCTCCAACCTAACCCTCCCCGACGGAAGATGCCGCAACAACCCAAACGAGTTGGTCGTCAAACGCGACTGCACCGCCCACTCCATCGAATACGACGTCGCAGCCAACACATTCCGCGCTCTCTTTGTCCAAACCAATGTCTGGTGCTCCTCCGGTTCGGTCTCTCCCGACGGAACATTAGTCCAAACCGGTGGCTTCAACGACGGCTACCGTGCGGTCAGAACCTTCACCCCGTGCCGCTCGTGCGACTGGGCAGAAGTTCAGCATGGACTCGCGGCGCAGAGATGGTACGCCACCAATCACATCTTGCCAGATGGACGTCAAATAATTATCGGAGGAAGAAGACAATTCAACTACGAGTTTTACCCCAAGACACAAGCCAAGAATACTTACAGTTTACCTTTTCTTGCTCAAACCAACGACGCTAACGCTGAAAACAATCTCTACCCGTTTGTTTTTCTAAACGTCGATGGCAACCTTTTTATCTTTGCCAACAACCGCGCTATCTTGTTCGATTACAATAAGAACAGTGTCGTGAGAACCTACCCTCAAATACCCGGTGGAGATCCACGGTGTTATCCTAGCACCGGTTCCGCAGTTTTGCTTCCTCTTCGAGAACCTAATGTGGAGGCTGAGGTTCTGATTTGTGGTGGAGCCCCGAGAGGGGCTTTTCGGAATACTCTCTCGGGTAAGTTTGTTGGAGCGTTGAGAACTTGCGCTCGGATTAAAATAACCGACCCGAAAGCGAATTGGGTGATGGAAACCATGCCGAGTGCGAGAGTTATGAGTGACATGGTTTTACTCCCCAACGGCGACGTTTTGATTGTTAATGGAGCAGCTGTGGGGACTGCGGGCTGGGAATTGGGCCGTAACCCGGTGTTAAACCCGTTTCTTTATAAACCCAACAAGCGGGTCGGGATGAGATTTGAGGTCCAGAACCCGTCTCATATTCCGAGGATGTACCACTCCGGTGCCGTTTTGCTTCGCGATGGGCGAGTTCTTCTCGCTGGGAGCAACCCTCACACGTATTACAATTTCACCAAAGTGTTGTTTCCAACGGAACTGCGGTTAGAAGCGTTTTCTCCTTGGTATCTTGAGCCCGGATTCTCTAACGTGCGTCCCGCAATAGTATCTCCTGCGTCCCAAACAAAACTCAAGTACGGTCAGACGTTGAGGCTTCGGTTTAAGGTGAGCGCGACTTTGGTTGGGGATTCGGTGTCTGTTACCATGCTGGCGCCGCCATTTAACACGCACTCGTTCTCCATGAATCAGAGGCTGTTGGTGCTGAAGCCGCACCATTTGAGTGGGGTTGGAGAATCAACGCACGAGGTTGAAGTTACCGCGCCGGCTTCCGCTGTTCTTGCGCCACCGGGTTTCTATCTGCTGTTTGTGGTCCATCAAGAAGTTCCAAGCCACGGTATTTGGGTCCAGATGGTGTGA 1593 0.5223 MTLLLLLILLFHAAEAKGQWQLLHKNIGIVAMHMQLLHNDRVIIFDRTDFGLSNLTLPDGRCRNNPNELVVKRDCTAHSIEYDVAANTFRALFVQTNVWCSSGSVSPDGTLVQTGGFNDGYRAVRTFTPCRSCDWAEVQHGLAAQRWYATNHILPDGRQIIIGGRRQFNYEFYPKTQAKNTYSLPFLAQTNDANAENNLYPFVFLNVDGNLFIFANNRAILFDYNKNSVVRTYPQIPGGDPRCYPSTGSAVLLPLREPNVEAEVLICGGAPRGAFRNTLSGKFVGALRTCARIKITDPKANWVMETMPSARVMSDMVLLPNGDVLIVNGAAVGTAGWELGRNPVLNPFLYKPNKRVGMRFEVQNPSHIPRMYHSGAVLLRDGRVLLAGSNPHTYYNFTKVLFPTELRLEAFSPWYLEPGFSNVRPAIVSPASQTKLKYGQTLRLRFKVSATLVGDSVSVTMLAPPFNTHSFSMNQRLLVLKPHHLSGVGESTHEVEVTAPASAVLAPPGFYLLFVVHQEVPSHGIWVQMV* 531
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso4g0233 530 Gene3D - 14 419 IPR037293 -
Gso4g0233 530 SUPERFAMILY Galactose oxidase, central domain 79 417 IPR011043 -
Gso4g0233 530 PANTHER SECRETED PROTEIN-RELATED 5 529 - -
Gso4g0233 530 Pfam Glyoxal oxidase N-terminus 32 269 IPR009880 -
Gso4g0233 530 Gene3D Immunoglobulins 423 530 IPR013783 -
Gso4g0233 530 Pfam Galactose oxidase-like, Early set domain 424 528 IPR015202 -
Gso4g0233 530 PANTHER OXIDASE, PUTATIVE, EXPRESSED-RELATED 5 529 - -
Gso4g0233 530 SUPERFAMILY E set domains 420 529 IPR014756 -
Gso4g0233 530 CDD E_set_GO_C 419 529 IPR015202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso4g0233 Gso-Chr4 2129389 2131313 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso4g0233 - - gmx:100784385 1079.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g0233 4 2129389 2131313 Gso4g0233 4 2129389 2131313 ECH
Gso4g0233 4 2129389 2131313 Gso6g0211 6 2026180 2028379 GST
Gso14g1830 14 50703550 50705408 Gso4g0233 4 2129389 2131313 PCT