Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso4g0231 ATGGAAGGTGTTGATCAAAGAAATAGTTCTGCATTTGGTGTTCCAGTTCCAAGACCACCAAACCAGAAATCTCGTATGCCACCATCTCACCCTAGTATCAATGTTTCACCTTCAGCAACTCCTTATTCCCAATACCCTCAGCGATTGCGTTCTCCGGGTTCCTCCCATTCGAGGTCTTTGTCTCAACCTCCCATTTTATCGTTGGATTCATTGCCCCCATTGAGTCCTTCCCCTGCTGCTGTTACCTCCATGTTTGACTCAATCTCAACAACTGATATGTCTGTGGAGGAAAGTAATGTTTCCTCTCAGGTGCCCCTCAATAGAGGGCATGCCCTTCTTCCTCCTAGGAAGGGACACCGGCGCTCTAGTAGTGATTCCCCTTTGGGAATCTCTGGTTTTATGCAGTCTTCTCCAGTTCCCTCCGGAGGAGAGAGCTCGGGGTTCGAGAAGCCGATTCAGTTGGTCTTGAAGGCGTCCTTTAGGGACAGCCTGGATGGGGGCCATGCTAATGAGCCTGTTAATGGGAGGAAGGAGGAGGCTGCGGATGATTTGTTCAGGGAATACATGAATTTGGACAACTTTGATAATCTGAACTTTCCTGGCATGGAAGATAAGGACTTGGATAGCAGGACCAGTGGTTCCAAGACAGTTGAGAGCAGCGATAATGAAGTTGAGAGTCATGTCAATGGGAAGGCGAGTGGGGCTCAGGGGGCAAGTTCAAGCTGCTCGGAGGAAAGGAGGGAAGGAGTCAAGAGGAGTTCAAATGGGGAGGTTGCACCGGGTTCCCGGCATCGGAGGAGTTTTTCGTTGGATAGTTCCATAAGGAACTTTAACATTGAAGATGGATTGCCTAAGCTTCCTCCTTCGAAAAATCAAATGGGTCAGCACTCACCTAGCAATTCGATGGATGGCAAAATGTCAGAAACCTCCACGGAGTTTGGAAATGGCGAATTTAGTGCAGAGGAGGTAAAGAAAATAATGGAAAGTGATAAACTAGCTGAAATTGCTTCGACTGATCCCAAACGTGCAAAAAGGATTTTGGCTAATCGTCAATCAGCTGCTCGTTCAAAGGAGAGGAAGATGCGATACATTGCTGAATTGGAACACAAAGTGCAAACTCTTCAGACAGAAACAACCACATTGTCTACTCAGTTTACCAAATTACAGAGGGATAACTCTGACCTTAAAAGTGAGAACAACGAGTGCAAATTAAGGCTTCAAGCCATGGAACAACAGTCTCTATTGAAAGATGCTCTGAACGAGACTTTGGATGCTGAAGTCCGGCGTTTGAGGCGTGCTGTTGCAGAACTTGGCGGTGAATCCCTCACAAGTTGCATGGCTCGACAGCTTGCTATTAACCAACAAATGTTTGAGTTACAGCATCAGCAGCCCAGCCAACAGAGACATTTTCTACTGCAAAATCACCATACTCAGGAAGAGATAGAGTCTCGATCACAGCAGATTCAAGGCAATGAATTGCATCCCCAGGCACAGATTCAGTCACAGCAGATTCAACGCAATGAATTGCATCCCCAGCCTTAA 1542 0.4682 MEGVDQRNSSAFGVPVPRPPNQKSRMPPSHPSINVSPSATPYSQYPQRLRSPGSSHSRSLSQPPILSLDSLPPLSPSPAAVTSMFDSISTTDMSVEESNVSSQVPLNRGHALLPPRKGHRRSSSDSPLGISGFMQSSPVPSGGESSGFEKPIQLVLKASFRDSLDGGHANEPVNGRKEEAADDLFREYMNLDNFDNLNFPGMEDKDLDSRTSGSKTVESSDNEVESHVNGKASGAQGASSSCSEERREGVKRSSNGEVAPGSRHRRSFSLDSSIRNFNIEDGLPKLPPSKNQMGQHSPSNSMDGKMSETSTEFGNGEFSAEEVKKIMESDKLAEIASTDPKRAKRILANRQSAARSKERKMRYIAELEHKVQTLQTETTTLSTQFTKLQRDNSDLKSENNECKLRLQAMEQQSLLKDALNETLDAEVRRLRRAVAELGGESLTSCMARQLAINQQMFELQHQQPSQQRHFLLQNHHTQEEIESRSQQIQGNELHPQAQIQSQQIQRNELHPQP* 514
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso4g0231 513 MobiDBLite consensus disorder prediction 194 314 - -
Gso4g0231 513 MobiDBLite consensus disorder prediction 1 148 - -
Gso4g0231 513 Gene3D - 340 440 - -
Gso4g0231 513 MobiDBLite consensus disorder prediction 290 314 - -
Gso4g0231 513 SMART brlzneu 337 401 IPR004827 GO:0003700|GO:0006355
Gso4g0231 513 MobiDBLite consensus disorder prediction 124 143 - -
Gso4g0231 513 Pfam bZIP transcription factor 341 399 IPR004827 GO:0003700|GO:0006355
Gso4g0231 513 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 339 402 IPR004827 GO:0003700|GO:0006355
Gso4g0231 513 Coils Coil 416 440 - -
Gso4g0231 513 SUPERFAMILY Leucine zipper domain 341 397 IPR046347 GO:0003700|GO:0006355
Gso4g0231 513 MobiDBLite consensus disorder prediction 483 513 - -
Gso4g0231 513 CDD bZIP_plant_RF2 342 392 IPR044759 GO:0003700|GO:0006355
Gso4g0231 513 MobiDBLite consensus disorder prediction 477 513 - -
Gso4g0231 513 PANTHER BZIP TRANSCRIPTION FACTOR 37 508 - -
Gso4g0231 513 MobiDBLite consensus disorder prediction 27 68 - -
Gso4g0231 513 PANTHER TRANSCRIPTION FACTOR POSF21-RELATED 37 508 - -
Gso4g0231 513 Coils Coil 357 412 - -
Gso4g0231 513 MobiDBLite consensus disorder prediction 76 106 - -
Gso4g0231 513 MobiDBLite consensus disorder prediction 226 243 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso4g0231 Gso-Chr4 2106062 2109950 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso4g0231 26 458 bZIP Transcription Factor Family AT4G38900 47.780 2.96e-98 305
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Gso4g0231 bZIP_1 1.9e-10 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso4g0231 - - gmx:100779731 917.531