Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso4g0229 ATGGGGAAATCTACCTCCTGCTTCAAACTAATCACTTGCGGTGGTGATGCGGCTGAGAAGGACGATTACCACCAAGTATCTGAGATCAAGGAATCTAATGATAAACGCGGATGGAGTTTCCGCAAGAAGTCTGCAAGGCATCGTGTGCTTAGCAATACTGTGATAGCAGAGGCCCCATCTTCTGCAAATAAGGAAAGTTCAGAATGTAATAATTTTAATTTTCAACCACTTCCTGAACCTAATGTTGTTGAGAAGATTTACACAACAAATTGCTCTGATGAGAAGCCCCAGTTATCTTCCTTTGAAAGCTCACAAATAGAAGAAACAAATGTCATTGAAACTGAGGAGAAGGTGGATGTGAATCCACCAGAGTCTGAGGTCATCATCATCCAGGCTGCTATTAGAGGGTTATTGGCTCATAGAGAACTACTACAGCTTAAGAAAGTAGTGAAATTGCAAGCTGCTGTTCGTGGGCACTTGGTCCGGAGACATGCTGTAGGAACCCTGCGTTGTGTTCAAGCCATCATCAAAATGCAGATCCTTGTGCGAGCTCGTCGTGCTCGGCAGTCATGTCTGGAAAACCATTTAAATCAAAAGGATGGCAAAAGGGATTCCTCAGAAGCTTTGGGAAATGAAAATCTCATGACCAAATCAAATGTGAATTACACTTCCATTGAGAAGCTGCTTAGCAATAATAGGTTTGCTAGTCAGCTGTTGGAATCAACACCAAAGAACAAACCTATCCATTTCAAGTGTGATCCTTCTAAATCCGATTCTGCTTGGAAATGGTTGGAAAGGTGGATGTCAGTATCATCAAAAGATATTGCAGAGTGCAAAGAAATTAGTTCTCTGATAGAGCAATCAAGGGAAAGCAAAGATAGCACTCCCATGTTTCAATTCGAAATGGGTATTCCATCTGAACCTTTTCCCCAAGCAGTTGACTCGAAGCTCACTGTTGAAGATTCACTTCTGCCATCTGAGGATGAAGAAAAGTTGATTACTTGTGATGCTGATGACTTTGAGTTTCAAGCAAGCTACTCCACATCATCTATTGTAAAAGATGACTTGGTACAGGTTCCTCCTGAAGAAAAAATTGCATATGATGCCAAAGTTGCCTCAGACGATGCTGATTCCTTCCAAAACGAAAAATCAGCATCAGATGCAAGTGCCCCATCAGAGCTTAATTCTATTCATAAGGGGCCTGAAATTGCCCCACCATCAGAGCTTAATTCTGTTCATAAGGGGCCTGAAATTGCCCCACCATCAGAGCATAATTCTCTTCAGAAGGGGACTGACATTGCCCCACCATCAGAGCATAATTCTCTTCAGAAGGGGACTGACATTGCCCCACCATCAGAGCATAATTCTCTTCAGAAGGGGACTGACATTGCCCCACCATCAGAGCATAATTCTCTTCAGAAGGGGACTGACATTGCCCCACCATTAGAGCATAACTCTCTTCATAAGGGACCTGAAACTGCCCCACCATCAGAGCTTAACTCTTTTAATCAGAAGCCTGAAATTGATGGTGAGCAGGGCAAACAATCCATGAAAAGATTTGCCTCAGACCAACTAGAGGCTGAAGGAAAGAAACCTGTAAATGGTTCAAGAAAGGTCAGTAATCCTGCATTTATTGCTGCACAGTCAAAATTCGAAGAGCTGAGCTCAATAGAAAATTCAGGTAGGACAAGCAGTTTGTCCTACCAAGATTCAGCTGTTGAATCACAAGGAGACACCTCTTCTGTTGGCAATGATACTGCATATAGATCAAAAGAGTTTGCATTTGAAAATCCTGCTGCTTATCTTTCTAGGTTTGCTGGTTCTGAATGTGGCACTGAACTCTCTATTTCTTCCACTCTTGATTCACCTGACATATCAGAGCCTGGCGCTATGGAAAATGAACGAGATGCCAAAGATTTAATGGAAGGGATTGGTAATCTTGAGAACACTATAAACCATGATGATGAGGCCAATGACAATGTTTCACGTGTCATCCCAGCTTCTAACCTAGCTACTTCTGTTTTGGATAAGTCAGAGATTGTTGATGACATTAGTGCCAATTTGGGTCACTCAGTGGTAGCTGTGGACTCTGAAGAGCCTGCTATTAAGACTGAGAAAAATGCACCTGACCTGCAGAGAGAGCTGCCAGAGTCTGTTCTGCAAGATTTAAGATCATCTCCAGAAGCTTCACCTAGAAGCCATTTAACTGTCCCTGAATCACAAGGAACGCCTTCAAGTGAAGTGTCTGTGAAACCTAAAGATAGCACTATCAACAAGACTAGATCTGGCAATAAACGTCGGAGCCTATCATTGAGTAACAAATCACCTACAAATCCAAATCATGATTCAGGCTCGAAAGACAGTAGGGAGCAACTGCCTAAAGATCAGCAGAATGGAAAGAGGCGCAATTCCTTTGGCTCAGTAAAGCCTGATAACATTGATCAAGAATCTAGAGATAATAGTACTAACAACAATTCTCTACCCCATTTCATGCAAGCTACAGAATCTGCTAGGGCCAAGGTTAATGCAAATAACTCTCCAAGATCAAGTCCAGATGTACATGAAGGAGATATCGAAGTTAAGAAGAGACATTCCTTACCTGGTGCCACTGGTAGGCAAGTTTCTCCACGCATCCAACGATCAACATCTAAGGCACAGCAGAGTGCAAAAGGAAACAATGTACATCCTCCTCAAGAGAGAAAATGGCTGAGGTGA 2715 0.4262 MGKSTSCFKLITCGGDAAEKDDYHQVSEIKESNDKRGWSFRKKSARHRVLSNTVIAEAPSSANKESSECNNFNFQPLPEPNVVEKIYTTNCSDEKPQLSSFESSQIEETNVIETEEKVDVNPPESEVIIIQAAIRGLLAHRELLQLKKVVKLQAAVRGHLVRRHAVGTLRCVQAIIKMQILVRARRARQSCLENHLNQKDGKRDSSEALGNENLMTKSNVNYTSIEKLLSNNRFASQLLESTPKNKPIHFKCDPSKSDSAWKWLERWMSVSSKDIAECKEISSLIEQSRESKDSTPMFQFEMGIPSEPFPQAVDSKLTVEDSLLPSEDEEKLITCDADDFEFQASYSTSSIVKDDLVQVPPEEKIAYDAKVASDDADSFQNEKSASDASAPSELNSIHKGPEIAPPSELNSVHKGPEIAPPSEHNSLQKGTDIAPPSEHNSLQKGTDIAPPSEHNSLQKGTDIAPPSEHNSLQKGTDIAPPLEHNSLHKGPETAPPSELNSFNQKPEIDGEQGKQSMKRFASDQLEAEGKKPVNGSRKVSNPAFIAAQSKFEELSSIENSGRTSSLSYQDSAVESQGDTSSVGNDTAYRSKEFAFENPAAYLSRFAGSECGTELSISSTLDSPDISEPGAMENERDAKDLMEGIGNLENTINHDDEANDNVSRVIPASNLATSVLDKSEIVDDISANLGHSVVAVDSEEPAIKTEKNAPDLQRELPESVLQDLRSSPEASPRSHLTVPESQGTPSSEVSVKPKDSTINKTRSGNKRRSLSLSNKSPTNPNHDSGSKDSREQLPKDQQNGKRRNSFGSVKPDNIDQESRDNSTNNNSLPHFMQATESARAKVNANNSPRSSPDVHEGDIEVKKRHSLPGATGRQVSPRIQRSTSKAQQSAKGNNVHPPQERKWLR* 905
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso4g0229 904 PANTHER PROTEIN IQ-DOMAIN 32 1 894 - -
Gso4g0229 904 MobiDBLite consensus disorder prediction 376 541 - -
Gso4g0229 904 PANTHER IQ-DOMAIN 5-RELATED 1 894 - -
Gso4g0229 904 MobiDBLite consensus disorder prediction 694 904 - -
Gso4g0229 904 MobiDBLite consensus disorder prediction 852 866 - -
Gso4g0229 904 Pfam Protein of unknown function (DUF4005) 819 886 IPR025064 -
Gso4g0229 904 Pfam IQ calmodulin-binding motif 147 164 IPR000048 GO:0005515
Gso4g0229 904 Pfam IQ calmodulin-binding motif 127 143 IPR000048 GO:0005515
Gso4g0229 904 SMART iq_5 122 144 IPR000048 GO:0005515
Gso4g0229 904 SMART iq_5 145 166 IPR000048 GO:0005515
Gso4g0229 904 MobiDBLite consensus disorder prediction 511 533 - -
Gso4g0229 904 MobiDBLite consensus disorder prediction 424 474 - -
Gso4g0229 904 MobiDBLite consensus disorder prediction 798 851 - -
Gso4g0229 904 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 127 192 IPR027417 -
Gso4g0229 904 MobiDBLite consensus disorder prediction 723 782 - -
Gso4g0229 904 MobiDBLite consensus disorder prediction 872 894 - -
Gso4g0229 904 Gene3D - 124 171 - -
Gso4g0229 904 ProSiteProfiles IQ motif profile. 124 151 IPR000048 GO:0005515
Gso4g0229 904 MobiDBLite consensus disorder prediction 783 797 - -
Gso4g0229 904 MobiDBLite consensus disorder prediction 554 585 - -
Gso4g0229 904 MobiDBLite consensus disorder prediction 496 510 - -
Gso4g0229 904 ProSiteProfiles IQ motif profile. 145 174 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso4g0229 Gso-Chr4 2077216 2083020 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso4g0229 484 904 IQD Protein Family AT1G19870 37.130 1.05e-51 190
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso4g0229 - - gsj:114408593 1781.92
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g0229 4 2077216 2083020 Gso4g0229 4 2077216 2083020 ECH
Gso4g0229 4 2077216 2083020 Gso6g0207 6 1969900 1975771 GST