Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso4g0228 ATGCGCCGATTGCAAACATTGAAACAAGTTTCATGGGCCTCCGATTTAGATCTTTGTCAGGTTAGGCTATTCTTATCAGAGGAATCTCCTTCACAGGTTGGGTTAAATTCTCAAGATAACCTCCAAGCAAAAACATCATTGTCGTTGCGTCCAGGTGGAGCAGGTTCTGATGACATTCTGCCTCCTGGATTTGAGGGAACTCATGCTTCAAGTCAGTTTGAGATTAAGCCATCCCAGATACCAGTTATTAAGTGGATTACTCCTCAAAAGATTGTTCTAAATGTCACATGGCGGGTAGTGTCTGGGGAAGAAAGCAAAGAAGCAGAGGATCAATGTCAGAGGGAGATGAGAGTACTGGAAGCTATTTATCCTCGCATATCTTCCATTCCTCTAAACCCTTCTGTTTCAATGGATGTTGAAGAGTTCCATTGCATTGATGGTCAAACTACTTTGATACCAATAACGCCAGTTGAAGATGAAGATGCAGCAGCAGAAACATTATCGTATTCCTTGGAACCATTTCATGTTTCCCAATCTCTTCAATTAGCTTCTGGTGTTCTGAAGGATTCAAACTCTGCTACAAGTATGCAGTTAGCTTGTGGTCTTGCATCTGATGTAGCTGTTGCTGCATCTGTTGCTTTAACTAACCTTGTGAAGAGCAATGAACATGGAAATTTTGTTGACCATGAATTACTTAATAATATTCTCAACAATCCAGAAGTGATTGAGAAGTTGGTTGGAGATTATGGAGCTATTAATAATTCACAATATGTACATAATGCGGGGTCATCCTTGGCGGCTTTTTCAAATCCTCCTATTCCTATTCAAGGACAAACCACTACACCTTCATCGGTTGTTTTTTCAACTACTTCTTCCTATACTCCCCCTATTGGAGGTCAGGCGGAACCTGTTACTACCCAATGGCCTCCTAGGCCTGCAGTGAGTTCAGCTATTGTTTCTTCTCCCATTGAGGTCCCTCCTGCAAGAGATGTAAACTACTATAAGAGCTTAATTCAACAACATGGAGGACATAAAGAAACACTTCCATACTCCAGTAAACGTCAGATTCCTCAGGCAGCAACAAACTATGAGACAACCTCCTACAATCATAGAGGTAAAGTGTCAAAACCAAAGATAATGAAGCCTTGTATCTTTTTCAACAGTTCTAGAGGATGTCGGAATGGAGCTAACTGTGCCTACCAGCATGATGCATCATTTCAGCCACGGGGTAATACTGTGTCAGGGATACAAAGTTCAAAGAGGATGAAAATGGATCATGAGATTAGCAATTAA 1293 0.4122 MRRLQTLKQVSWASDLDLCQVRLFLSEESPSQVGLNSQDNLQAKTSLSLRPGGAGSDDILPPGFEGTHASSQFEIKPSQIPVIKWITPQKIVLNVTWRVVSGEESKEAEDQCQREMRVLEAIYPRISSIPLNPSVSMDVEEFHCIDGQTTLIPITPVEDEDAAAETLSYSLEPFHVSQSLQLASGVLKDSNSATSMQLACGLASDVAVAASVALTNLVKSNEHGNFVDHELLNNILNNPEVIEKLVGDYGAINNSQYVHNAGSSLAAFSNPPIPIQGQTTTPSSVVFSTTSSYTPPIGGQAEPVTTQWPPRPAVSSAIVSSPIEVPPARDVNYYKSLIQQHGGHKETLPYSSKRQIPQAATNYETTSYNHRGKVSKPKIMKPCIFFNSSRGCRNGANCAYQHDASFQPRGNTVSGIQSSKRMKMDHEISN* 431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso4g0228 430 PANTHER ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 6-RELATED 1 426 - -
Gso4g0228 430 MobiDBLite consensus disorder prediction 408 430 - -
Gso4g0228 430 ProSiteProfiles Zinc finger C3H1-type profile. 377 405 IPR000571 GO:0046872
Gso4g0228 430 PANTHER ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 6 1 426 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso4g0228 Gso-Chr4 2072730 2075892 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Gso4g0228 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso4g0228 - - gmx:100783321 838.18
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g0228 4 2072730 2075892 Gso4g0228 4 2072730 2075892 ECH
Gso4g0228 4 2072730 2075892 Gso6g0206 6 1963582 1969005 GST