Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso4g0223 ATGGCTTTGAGAAAATCAAGTAAACTTCCTCAGACAGCACTAATCAAGCAAATCCTCAAGAGGTGTTCGAGTTTAGGGAGGAAAGATGATCAAGGCCTTCTGGACGTGCCAAAGGGTCACTTTGTTGTATATGTTGGAGAAAACAGAAGCAGATATATTGTTCCTATTTCCTTCCTAAGTCGCCCTGAGTTCCAAACACTTCTCCACCAGGCTGAAGAAGAGTTTGGCTTTGATCACGAAAAGGGTCTCACTATTCCATGCGAAGAGGACGTTTTTGAGTCTCTCACCTCCATGCTCAGATGA 303 0.4389 MALRKSSKLPQTALIKQILKRCSSLGRKDDQGLLDVPKGHFVVYVGENRSRYIVPISFLSRPEFQTLLHQAEEEFGFDHEKGLTIPCEEDVFESLTSMLR* 101
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso4g0223 100 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 6 100 IPR003676 GO:0009733
Gso4g0223 100 PANTHER AUXIN-INDUCED PROTEIN 15A-LIKE 6 100 - -
Gso4g0223 100 Pfam Auxin responsive protein 29 99 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso4g0223 Gso-Chr4 2019740 2020519 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso4g0223 3 99 Calmodulin-binding Proteins AT4G34750 39.000 1.88e-21 80.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso4g0223 K14488 - gmx:100778552 202.216
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g0223 4 2019740 2020519 Gso11g0644 11 5741534 5742412 ECH
Gso4g0223 4 2019740 2020519 Gso4g0223 4 2019740 2020519 ECH