Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso4g0207 ATGACTCTTGAAGATTTCTTTACCTTGTCTGAGATGAAAGATGGGCTCACAGCACCTTCTCGGGTGCAGGAGCTGGTCTCTGTGATGCAAAAGGAGAAAGATAGTGAGGTTAAAAATGCTGCTGATGTGACAAGGCAGTGGGCTGCTGTTGCAAGCACTATTGCTGCTACAGAGAATAAAGATTGCCTTGATCTTTTTATTCAATTAGATGGACTTTGCTTCATTAATAGATGGTTAAAGGATGCCCAAGATTTTGGGGTTGATGCAAACGACAGCTTCGTTGAAGAATCAATCACTGCAATGTTACGTGCAGTTGAAAAGCTGCATATAGACAGTGAGAAGTCAATGTCTTCAGGAATTCGCATCACTGTAAGTAATCTTCTTGGCCATCATAGTGCTAGGGTTCAGGATAGAGCAAGAACGTTGTTTGACAGCTGGAAGGGAGTTGGAAATGGTGATACTGAATCTCATGATGTGGAACTTGCTAAGGTTGACAATTCAAGTGACAAGATTGTCAGGGAGGAAACACAGCCATCTGCTGCAAATGAAGCTGGCAATGATAATGATCCTGCATCAGGACTAATTGGAAGTGAGAAATCTCTGTTGAAAAGCTCGGATAATTTACCGGTACATAGTTCTGATAATGTGCTCCAGTTATCTGCCAGTGTGGAATGTATTGACATCAAAGTGGGATCGGAAAACCATGTTGCTGGTGTTCCATCTTCTGCTCAAGAAGTTGCTCCCGCTCATGAAGGATTGCCTATATGCACTACAGGTGAGACCACTTCGGCTGGAACCTGTAACTTTCCCATTCCAAATCAAAGCAGTTTTGAAGGACAGTCAGATGTGGTACAGTTAAGTGACTTAGCTAAAGTGGAAAAGCAGGAGCAAAACATTAATGACCCTCCAGAAAAATTAGGAGCACCAGAGATCTGTTCTGTGTCCTCTAATAAGCCAGAGTCTGAGCCTGTTTCCATGGTTGCTTGCGAAGCAAAAGCACCAGAGTCTGTGAAAAACCCAGCTTTAGAGCAAAATGTTGAACACAATGAGGATGATGTTTGTCGTAATTTAACTAATTCTGCTAGTATGAGGACACCTGCATCTGATAGGAGTGGGGAAGATGATGTAACTAGCATTACACAAGTTTTTAAAGCTACAGAAAATGATAATGATTGTTGTTCTAATGCATTGCAGGGCGCATCAGTCAGTGACAGTAACTTGGGAAAGACTGAGGTGTTAGACGTGTCTGTCTTTGGAACAGAATATGTCACAGCATCAAAGGAAGGCAAGGGCCATGAAGAAGATACATCAATTGGTTCTGATTCTAGTAAACCCGGAATAGATTTCAGAAGCTCTAACATAATTGACAAGAGAGGTTCTGACAATGAACTTGACTGTGGCATTGTGGATGCTTTAGAATTTGCTCGAAAAATTGCTCAGGAAGTTAATAGAGAAGTCAGCTGTTCTTCAGAAAAAGTCTCAGAACACAGAATCAGGCAACCATGCAGTCCAGATTCTGTAAGAAAAGAGGACGAGCTCACTCCTGTCCCACCCAAGGAGGTTTCCTCCAGACAAAGCCATGCTACTGAGGCATGTTCAATGGAGGGGCATGTGAGTATTTTAGACAACAATGAGGCTGAGCCGGAATGCAGACCCTATGTGGTGTCCTTAGAGGTGACTGAAAAAGCTCAAGATTCAGGAGGTAATTCAGAGAAACGACTCTGCGGCTTTGATCTCAATGAAGTTGGTGCTGATGATATGGATGTTTCTGTAAATACTATGTCTACCCCAATACCAGTTGTCTCTGCTTCAAGGCCTGCACCAACTCCTGGGTTGACTGGGGCCCCTTTGCAGTTTGAGGGAACACTTGGATGGAAAGGGTCAGCTGCCACCAGTGCCTTTCGACCTGCGTCGCCTCGTAAAAATTGTGATAATGATAGGAATCTTTCTGTTGATATGAACTTTGATACTTCCAAGCAGAGGCAGGATTGGCTTGATTTTGATCTAAATGTGGCTGAGGGTGAAGAAGGCAATGTAAAACCTACTGCTGAATCTTCAGGCAGGCCTTCTGGGCAATCGTCATTTGAATTTAGTCCTAAAAAATCAAGCAGGCTTGAATTTGATTTGAACAGTACCGGTGATGATGGTGACACCCAACCTTCAGATCAAAGAATGGAGGGACAACTCTTTCTTGGAAGAAATGGCTGTTGGAGCCCATCCCCTGCATCGTCGTCCTCATCAATGCAGCCATCTGTTAGAAACATTGATTTGAATGACAGGCCGTGCCTTCAAACCGATTTGGTAGACCAGGGCCCCATTAAGTCTGCCCATCTTATCAATGCATTTGGTTCTAAATCATCAAATGCTCCTGTTATCTCTCTTCTGGGTGCCAAGGTAGAAGTTGGTAAAAAAGAATGTGTTCCTCAAAGGTTGTCTTTGCAGAATGGCAAGGCTACTGAACCTGCAATAGAACTAACAATGTCAAGAGCAGGTAGCGTTTTAGGGATGACCCCAACAGTACCCTTCAATCATTCATCTGTTTTTGGCTATAATGGAGTGGCGTCAGCATCAGTGACACCCGCAATGTCTTTTTCATCAGCCATGTACGGATCAGGTGGCACAATTCCATACATGGTGGACTCAAGAGGAGCTCCAGTTGTCCCTCAAGTGGGTGGATCTTCATCAACTGTCCTTTCATCTTACTCTCAGCCACCAATCTTTATGAACATGGCTGGTACACAACTTGGTCTGAATGGATTTGGACCTTCACGTCCTAACTTTGACCTGAACTCTAGCTTCATGATTGAGGGTGGGAATAGAGACACATTGGCTGCAAGGCAATTTTTCTTTCCTGTTCAGGGAAGGGCTGTGGAGGAGCAAGTAAGATCCATGCCGCAACCCTCCAGTTCGGGGGTTAGTGGGAAACGAAAAGAACCAGACAGTGGTTTGGAACCCTACCCATTTATCTACAAAAATCCGCAACCTCCATGGAAGTAG 2997 0.4404 MTLEDFFTLSEMKDGLTAPSRVQELVSVMQKEKDSEVKNAADVTRQWAAVASTIAATENKDCLDLFIQLDGLCFINRWLKDAQDFGVDANDSFVEESITAMLRAVEKLHIDSEKSMSSGIRITVSNLLGHHSARVQDRARTLFDSWKGVGNGDTESHDVELAKVDNSSDKIVREETQPSAANEAGNDNDPASGLIGSEKSLLKSSDNLPVHSSDNVLQLSASVECIDIKVGSENHVAGVPSSAQEVAPAHEGLPICTTGETTSAGTCNFPIPNQSSFEGQSDVVQLSDLAKVEKQEQNINDPPEKLGAPEICSVSSNKPESEPVSMVACEAKAPESVKNPALEQNVEHNEDDVCRNLTNSASMRTPASDRSGEDDVTSITQVFKATENDNDCCSNALQGASVSDSNLGKTEVLDVSVFGTEYVTASKEGKGHEEDTSIGSDSSKPGIDFRSSNIIDKRGSDNELDCGIVDALEFARKIAQEVNREVSCSSEKVSEHRIRQPCSPDSVRKEDELTPVPPKEVSSRQSHATEACSMEGHVSILDNNEAEPECRPYVVSLEVTEKAQDSGGNSEKRLCGFDLNEVGADDMDVSVNTMSTPIPVVSASRPAPTPGLTGAPLQFEGTLGWKGSAATSAFRPASPRKNCDNDRNLSVDMNFDTSKQRQDWLDFDLNVAEGEEGNVKPTAESSGRPSGQSSFEFSPKKSSRLEFDLNSTGDDGDTQPSDQRMEGQLFLGRNGCWSPSPASSSSSMQPSVRNIDLNDRPCLQTDLVDQGPIKSAHLINAFGSKSSNAPVISLLGAKVEVGKKECVPQRLSLQNGKATEPAIELTMSRAGSVLGMTPTVPFNHSSVFGYNGVASASVTPAMSFSSAMYGSGGTIPYMVDSRGAPVVPQVGGSSSTVLSSYSQPPIFMNMAGTQLGLNGFGPSRPNFDLNSSFMIEGGNRDTLAARQFFFPVQGRAVEEQVRSMPQPSSSGVSGKRKEPDSGLEPYPFIYKNPQPPWK* 999
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso4g0207 998 MobiDBLite consensus disorder prediction 167 197 - -
Gso4g0207 998 MobiDBLite consensus disorder prediction 675 723 - -
Gso4g0207 998 MobiDBLite consensus disorder prediction 959 998 - -
Gso4g0207 998 PANTHER TRANSCRIPTION ELONGATION FACTOR (TFIIS) FAMILY PROTEIN-RELATED 1 998 - -
Gso4g0207 998 MobiDBLite consensus disorder prediction 493 526 - -
Gso4g0207 998 PANTHER TRANSCRIPTION ELONGATION FACTOR (TFIIS) FAMILY PROTEIN 1 998 - -
Gso4g0207 998 Pfam TFIIS helical bundle-like domain 101 147 IPR017923 -
Gso4g0207 998 MobiDBLite consensus disorder prediction 425 454 - -
Gso4g0207 998 SUPERFAMILY Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 61 156 IPR035441 -
Gso4g0207 998 MobiDBLite consensus disorder prediction 683 700 - -
Gso4g0207 998 ProSiteProfiles TFIIS N-terminal domain profile. 73 153 IPR017923 -
Gso4g0207 998 Gene3D Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 17 151 IPR035441 -
Gso4g0207 998 MobiDBLite consensus disorder prediction 493 517 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso4g0207 Gso-Chr4 1863454 1870077 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR IWS1 Gso4g0207 Med26 4.7e-05 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso4g0207 - - gmx:102669997 1967.97
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g0207 4 1863454 1870077 Gso4g0207 4 1863454 1870077 ECH