Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso4g0203 ATGAGAGGGGTGAAGAGAGCAGTATTTGTAGGCAGAGCCCTAAGAAGCAATTCCAACACCGCCGTGTACGGTGTTGGTGCCACCCTTCATCGAGATCGAATGGCTCCCCATGGCTGCTTAACCCCATCAAATCCAAATCCTTCTGTTTCTGTTACTGGGTTTAGATACCTTTCTGCTTCTGCTGCTGCCACGTCTCTTGCCCAAGACGCTCAGACCAAGGCCTTCAAACCCAAGGAACTTGTCCTCTTTCAGTACCAGGCCTGTCCATTCTGCAACAAGGTTGCAGCGTTTCTGGACTATTATGATATTCCATTCAAAGTGGTTGAGGTGAATCCCATAAACAAGAAGGAGATCAAATGGTCCGACTACAAGAAGGTGCCTATCCTCACCGTTGATGGTGAACAAATTGTTGACTCTTCAGACATAATTGATAAGTTGATCAAAAGGATACATCCAGATTATGACCTAAATGCTGAAGAAGAGAAGAAGTGGCGACAGTGGGTGGATAATCACTTGGTGCATGTCTTGTCACCGAATATATATCGGAATGTTCCTGAAGCTCTTGAATCATTTGATTACATCACCACCCAAGGAAATTTCAGTTTTTCTGAGAGATTAGTGGCAAAGTATGGTGGGGCTGCAGCTATGTATTTTGTGTCAAAGAAATTGAAGAAGAAACACAACATCACTGATGAGCGTGCAGCACTGTATGGAGCTGCCGAACAATGGGTTGATGCTTTGAAGGGCCGAAAATTTCTTGGTGGGTTGGATCCTAATTTAGCAGATCTTGCTGTGTTTGGTGTTCTTAGACCCATCCGCCATCTCAAGTCAGGTAGAGATATGCTAGAGCACACCCGGATTGGGAAATGGTTTTCTCAGATGGATCGTGTGGTAGGACAGTCTTCTAGGGTGAGTGAGCAGAGCTAG 927 0.4542 MRGVKRAVFVGRALRSNSNTAVYGVGATLHRDRMAPHGCLTPSNPNPSVSVTGFRYLSASAAATSLAQDAQTKAFKPKELVLFQYQACPFCNKVAAFLDYYDIPFKVVEVNPINKKEIKWSDYKKVPILTVDGEQIVDSSDIIDKLIKRIHPDYDLNAEEEKKWRQWVDNHLVHVLSPNIYRNVPEALESFDYITTQGNFSFSERLVAKYGGAAAMYFVSKKLKKKHNITDERAALYGAAEQWVDALKGRKFLGGLDPNLADLAVFGVLRPIRHLKSGRDMLEHTRIGKWFSQMDRVVGQSSRVSEQS* 309
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso4g0203 308 Pfam Glutathione S-transferase, N-terminal domain 82 149 IPR004045 -
Gso4g0203 308 Gene3D - 156 304 - -
Gso4g0203 308 CDD GST_C_mPGES2 154 299 IPR034335 -
Gso4g0203 308 PANTHER GLUTATHIONE S-TRANSFERASE FAMILY PROTEIN 1 305 - -
Gso4g0203 308 SUPERFAMILY GST C-terminal domain-like 152 298 IPR036282 -
Gso4g0203 308 SFLD Prostaglandin E synthase like.1 60 305 IPR034334 GO:0050220
Gso4g0203 308 Gene3D Glutaredoxin 67 151 - -
Gso4g0203 308 SUPERFAMILY Thioredoxin-like 79 172 IPR036249 -
Gso4g0203 308 PANTHER MICROSOMAL PROSTAGLANDIN E SYNTHASE-2 1 305 - -
Gso4g0203 308 SFLD Prostaglandin E synthase like 60 305 - -
Gso4g0203 308 ProSitePatterns Glutaredoxin active site. 82 98 IPR011767 -
Gso4g0203 308 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 78 155 IPR004045 -
Gso4g0203 308 ProSiteProfiles Glutaredoxin domain profile. 68 167 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso4g0203 Gso-Chr4 1831642 1834145 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso4g0203 55 162 Glutathione S-transferase Gene Family AT5G16710 29.091 2.06e-06 46.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso4g0203 K05309 - gmx:100804696 617.461
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g0203 4 1831642 1834145 Gso4g0203 4 1831642 1834145 ECH