Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso4g0174 ATGCCGCTCAAGTTGGCGGGAGGAGCCACTGTCGGTTCCCTTCTCCTATGTGTTGCTATTTCTCTCTTTCACATCGCTGGGGCCGAAGATCCCTACAGGTTCTTCAACTGGAATGTTACTTATGGTGACATTTACCCTCTTGGTGTTCGCCAAACGGGAATATTGATCAACGGGCAATTCCCAGGTCCAGATATTCATTCTGTTACCAACGACAACCTCATCATCAATGTCTTCAACAGCTTGGATGAGCCCTTTCTTCTCTCTTGGAATGGGATCCAGCAGAGAAGGAACTCATTCGAAGATGGTGTTTTTGGAACAACGTGCCCCATCCCACCAGGGAAGAATTTTACTTACATCCTTCAAGTCAAAGATCAAATTGGGAGTTTTTACTATTTCCCATCCCTTGCATTCCACAAAGCCGCTGGCGGTTTTGGAGGCATTAGGATTCTCAGCAGACCAAGAATTCCCGTCCCATTCCCTGATCCAGCTGGTGATTACACTGTCCTCATTGGAGATTGGTACAAGTCCAACCACACGACTTTGAAAGCCCGTCTTGATAGGGGCAAGAAGCTGCCTTTTCCCGATGGAATACTTATCAATGGTCGCGGACCTAATGGAGTGTCTTTAAACGTTGAACAAGGAAAGACTTATAGGCTTAGAATATCAAATGTGGGGCTGCAACACTCCCTTAACTTTAGAATCCAAAACCACAAAATGAAGCTGGTAGAAGTGGAAGGAACGCACACCCTTCAGACAACGTACTCCTCTCTTGATGTTCATGTAGGCCAATCTTATTCAGTGCTGGTAACTGCGGATCAACCTGCTCAGGATTATTATATTGTGTTTTCCTCACGATTCTCCTACAAGGTCCTCACCACCACTGGAGTGCTTCGCTATAGCAACTCCGCAGGCCCGGTATCAGGCCCACCCCCTGGTGGACCTACAATCCAAATTGACTGGTCTTTGAACCAGGCCCGCTCCATTAGGACAAACCTTACAGCAAGTGGACCGAGGCCAAACCCGCAAGGATCGTACCATTACGGTATGATAAACACGACAAAGACGATCATATTGGCGAGTTCGGCTGGTCAAGTAAATGGGAAGCAAAGATACGCAATTAACAGCGTGTCTTATGTTGCCCCAGACACCCCTCTTAAGCTCGCCGATTACTTCAAAATCTCCGGTGTTTTCCGCCCCGGAAGCATATCTGACAGACCCACTGGTGGCGGCATTTACCTTGACACTTCTGTGTTACAAGCTGACTACAGAACTTTTGTTGAGATTGTCTTCCAAAACAACGAGAAAATCGTTCAGAGCTACCATCTTGATGGCTACTCTTTCTTTGTCGTTGGTATGGACGGGGGACAGTGGACACCTGCTAGCAGGAACCAGTACAATCTCCGAGATGCAGTTGCACGTTGCACCACACAGGTATACCCCTTTTCATGGACTGCTATTTATATTGCCCTTGACAATGTGGGAATGTGGAACTTGAGGTCTGAGTTTTGGGCACGACAATACCTTGGGCAACAGTTATATTTACGCGTTTATACAGCATCAACCTCAATCAGAGACGAGTTCCCTGTTCCAAAGAATGCAATTCTTTGTGGTAGGGCTAGTGGGAGACACACGCGACCCCTTTGA 1644 0.4726 MPLKLAGGATVGSLLLCVAISLFHIAGAEDPYRFFNWNVTYGDIYPLGVRQTGILINGQFPGPDIHSVTNDNLIINVFNSLDEPFLLSWNGIQQRRNSFEDGVFGTTCPIPPGKNFTYILQVKDQIGSFYYFPSLAFHKAAGGFGGIRILSRPRIPVPFPDPAGDYTVLIGDWYKSNHTTLKARLDRGKKLPFPDGILINGRGPNGVSLNVEQGKTYRLRISNVGLQHSLNFRIQNHKMKLVEVEGTHTLQTTYSSLDVHVGQSYSVLVTADQPAQDYYIVFSSRFSYKVLTTTGVLRYSNSAGPVSGPPPGGPTIQIDWSLNQARSIRTNLTASGPRPNPQGSYHYGMINTTKTIILASSAGQVNGKQRYAINSVSYVAPDTPLKLADYFKISGVFRPGSISDRPTGGGIYLDTSVLQADYRTFVEIVFQNNEKIVQSYHLDGYSFFVVGMDGGQWTPASRNQYNLRDAVARCTTQVYPFSWTAIYIALDNVGMWNLRSEFWARQYLGQQLYLRVYTASTSIRDEFPVPKNAILCGRASGRHTRPL* 548
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso4g0174 547 SUPERFAMILY Cupredoxins 28 179 IPR008972 -
Gso4g0174 547 Pfam Multicopper oxidase 165 301 IPR001117 -
Gso4g0174 547 Gene3D - 163 338 IPR008972 -
Gso4g0174 547 Gene3D - 32 153 IPR008972 -
Gso4g0174 547 PANTHER MULTI-COPPER OXIDASE 11 540 IPR045087 -
Gso4g0174 547 SUPERFAMILY Cupredoxins 349 538 IPR008972 -
Gso4g0174 547 Pfam Multicopper oxidase 383 519 IPR011706 GO:0005507|GO:0016491
Gso4g0174 547 Gene3D - 348 543 IPR008972 -
Gso4g0174 547 PANTHER MULTI-COPPER OXIDASE-LIKE PROTEIN 11 540 - -
Gso4g0174 547 Pfam Multicopper oxidase 39 152 IPR011707 GO:0005507
Gso4g0174 547 SUPERFAMILY Cupredoxins 159 339 IPR008972 -
Gso4g0174 547 CDD CuRO_3_AAO_like_1 381 501 IPR034275 GO:0005507
Gso4g0174 547 CDD CuRO_1_AAO_like_1 34 149 IPR034273 GO:0005507
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso4g0174 Gso-Chr4 1528255 1536331 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso4g0174 - - gmx:100815570 1110.52
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g0174 4 1528255 1536331 Gso4g0174 4 1528255 1536331 ECH
Gso4g0174 4 1528255 1536331 Gso6g0161 6 1494872 1502444 GST
Gso14g1889 14 51326088 51330999 Gso4g0174 4 1528255 1536331 PCT
Gso17g2220 17 41879866 41886710 Gso4g0174 4 1528255 1536331 PCT
Gso4g0174 4 1528255 1536331 Gso14g1889 14 51326088 51330999 PCT
Gso4g0174 4 1528255 1536331 Gso17g2220 17 41879866 41886710 PCT