Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso4g0150 ATGGGAAACTGTTTCAGAAAGACAGCAGCTGATGACAACAAGATTCACAAGAATGAGTATAAGACTCCCACCACCAATAATCCACGCCCTTCTCCCCCAGAGAGATTGGTGAAGGAAACAGTGGAAGAAAGAGGTGAGCGTCCACAAAACAACAGCGTTCCAAAGCTTATAAAGTACACGTTGGATGAGTTGAGAAGTGCGACCAGAAACTTCAGACCAGACACGGTCCTAGGCGAGGGTGGTTTTGGACGTGTTTTCAAAGGGTGGATTGATAAGAACACCTTCAAGCCCTCAAGAGTTGGTGTTGGAATCCCCGTGGCTGTGAAGAAGTCTAACCCCGATAGCCTCCAGGGTCTAGAAGAATGGCAGAGTGAAGTGCAACTTTTGGGGAAATTCTCTCATCCAAACCTGGTTAAACTAATTGGCTATTGCTGGGAGGAAAGTCAATTCCTGCTCGTATACGAATACATGCAAAAGGGCAGCCTCGAAAGCCACCTCTTTAGAAGAGGCCCAAAACCACTTTCATGGGATATAAGACTCAAGATAGCCATAGGAGCTGCCAGAGGTCTAGCTTTCTTGCATACATCGGAAAAGTCTGTCATCTATAGAGACTTCAAGTCTTCCAACATTTTGCTTGATGGGGATTTTAATGCAAAACTATCGGACTTTGGATTGGCAAAGTTTGGCCCTGTCAACGGAAAATCCCACGTAACCACGCGGATCATGGGCACGTATGGTTACGCGGCCCCTGAATACATGGCCACAGGCCATCTGTATATTAAAAGCGATGTATATGGATTTGGCGTTGTTCTGCTAGAAATGCTAACAGGTAGAGCAGCTCTAGACACAAATCAGCCAACGGGTATGCAGAATTTGGTAGAGTGCACTATGTCATCTCTACATGCCAAAAAGAGACTGAAAGAGGTAATGGATCCAAACATGGAGGAACAATATTCATTAAGGGCAGCATTTCAAATAGCGCAACTTATTTTGAAATGTTTAGAATCTAAGCCAAAGAAACGACCGTCTATGGAGGAGGTTTTGGAAACCTTAGAAAAAGTTGAAGCCATAAAATACAAACCCAAAGTGAAGAAAAGAAGTGCGGTTCGTTAG 1113 0.4438 MGNCFRKTAADDNKIHKNEYKTPTTNNPRPSPPERLVKETVEERGERPQNNSVPKLIKYTLDELRSATRNFRPDTVLGEGGFGRVFKGWIDKNTFKPSRVGVGIPVAVKKSNPDSLQGLEEWQSEVQLLGKFSHPNLVKLIGYCWEESQFLLVYEYMQKGSLESHLFRRGPKPLSWDIRLKIAIGAARGLAFLHTSEKSVIYRDFKSSNILLDGDFNAKLSDFGLAKFGPVNGKSHVTTRIMGTYGYAAPEYMATGHLYIKSDVYGFGVVLLEMLTGRAALDTNQPTGMQNLVECTMSSLHAKKRLKEVMDPNMEEQYSLRAAFQIAQLILKCLESKPKKRPSMEEVLETLEKVEAIKYKPKVKKRSAVR* 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso4g0150 370 CDD STKc_IRAK 77 353 - -
Gso4g0150 370 PANTHER OS01G0588500 PROTEIN-RELATED 41 367 - -
Gso4g0150 370 ProSitePatterns Serine/Threonine protein kinases active-site signature. 200 212 IPR008271 GO:0004672|GO:0006468
Gso4g0150 370 PANTHER SERINE/THREONINE-PROTEIN KINASE CX32, CHLOROPLASTIC-RELATED 41 367 - -
Gso4g0150 370 SUPERFAMILY Protein kinase-like (PK-like) 52 351 IPR011009 -
Gso4g0150 370 Gene3D Phosphorylase Kinase; domain 1 41 156 - -
Gso4g0150 370 Pfam Protein tyrosine and serine/threonine kinase 75 351 IPR001245 GO:0004672|GO:0006468
Gso4g0150 370 MobiDBLite consensus disorder prediction 1 51 - -
Gso4g0150 370 ProSiteProfiles Protein kinase domain profile. 71 354 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso4g0150 370 Gene3D Transferase(Phosphotransferase) domain 1 157 368 - -
Gso4g0150 370 ProSitePatterns Protein kinases ATP-binding region signature. 77 110 IPR017441 GO:0005524
Gso4g0150 370 MobiDBLite consensus disorder prediction 35 49 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso4g0150 Gso-Chr4 1312153 1317232 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso4g0150 3 351 Glycoside Hydrolase AT3G07070 44.475 8.31e-96 290
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Gso4g0150 PK_Tyr_Ser-Thr 1.9e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso4g0150 - - gmx:100812725 740.725
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g0150 4 1312153 1317232 Gso4g0150 4 1312153 1317232 ECH