Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Gso4g0133 | ATGACTCGTGCCTTGAGATATTTAGGCGAGCGAAACTCGTCCACCGACTCCGCTGTCGTCGATTCCGACTTCGTCGTCATCCTCGCCGCCCTCCTCTGCGCTCTCATCTGCGTTCTCGGCCTCGTCGCCGTCGCCCGCTGCGGCTGTCTCCGCCGCCTCCGCCTCTCCTCCTCTGCAACCACTCCCCAGTCTCCTACCTCCGCCGCCAACAAAGGCGTCAAGAAGAAGGTCCTCCGCTCCCTCCCCAAGCTCACCGCCACAGCGGAATCGGCGGTCAAGTTTGCGGACTGCGCGATCTGCCTCACGGAGTTCGCCGCCGGAGACGAAATCCGAGTGCTGCCTCAGTGCGGACATGGCTTCCACGTCAGCTGCATCGACGCCTGGCTCAGATCGCATTCCTCGTGTCCGTCATGCCGTCAGATTCTGGTGGTTTCTCGCTGCGACAAGTGCGGCGGGATCCCGGCTCCGGCGAGCTCCAGCTCCGATCCGCCGCCGCCGGACTCCGAGGCCAGATTTAAGGGAAGGGAGGACGACGCCAATAGGTTTTTGCCTTAG | 555 | 0.6342 | MTRALRYLGERNSSTDSAVVDSDFVVILAALLCALICVLGLVAVARCGCLRRLRLSSSATTPQSPTSAANKGVKKKVLRSLPKLTATAESAVKFADCAICLTEFAAGDEIRVLPQCGHGFHVSCIDAWLRSHSSCPSCRQILVVSRCDKCGGIPAPASSSSDPPPPDSEARFKGREDDANRFLP* | 185 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Gso4g0133 | 184 | PANTHER | RING-H2 FINGER PROTEIN ATL8 | 1 | 177 | - | - | |
Gso4g0133 | 184 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 59 | 143 | IPR013083 | - | |
Gso4g0133 | 184 | MobiDBLite | consensus disorder prediction | 168 | 184 | - | - | |
Gso4g0133 | 184 | CDD | RING-H2_PA-TM-RING | 96 | 139 | - | - | |
Gso4g0133 | 184 | SUPERFAMILY | RING/U-box | 79 | 145 | - | - | |
Gso4g0133 | 184 | ProSiteProfiles | Zinc finger RING-type profile. | 97 | 139 | IPR001841 | - | |
Gso4g0133 | 184 | MobiDBLite | consensus disorder prediction | 154 | 184 | - | - | |
Gso4g0133 | 184 | SMART | ring_2 | 97 | 138 | IPR001841 | - | |
Gso4g0133 | 184 | PANTHER | RING-H2 FINGER PROTEIN ATL61-RELATED-RELATED | 1 | 177 | - | - | |
Gso4g0133 | 184 | Pfam | Ring finger domain | 96 | 139 | IPR001841 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Gso4g0133 | Gso-Chr4 | 1170339 | 1171300 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Gso4g0133 | 1 | 184 | C3H Transcription Factor Family | AT1G20823 | 62.626 | 6.37e-68 | 204 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Gso4g0133 | - | - | gmx:100794614 | 315.849 |