Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso4g0111 ATGGCTGCATCCGCCACCTCCACCGGCGGTGCGCTGCCGGAGCTAACTAACCGAACTCCCTTACTCGGCCTCAAACTCTACGTCCTACTCCTCATTGTAGCTCTAATCGTGATCGCAACGGTGGTCCTGATCCTCGTGTTCGTTCGCCGGAGCCGGAGCTCGAAGAAGCGGAAAATGCGAGTGAAGCACAGCTCCGGCGCGATCCCACTGGTCTCGAAGGAGATCGTGGAGGTGAATACTCTGGAGCTGAAAATCGATCCGAAGAAGAAGGAGGTGGAGATGGAAGAGAGTGCGTCGGTGGAGTCGCCGAACATAGGGTGGGGACGTTGGTATAGCCTCAAGGAGCTTGAGAATGCCACTGAAGGCTTTGCGGAACAGAATGTGATCGGAGAAGGAGGCTATGGGATTGTCTACAAAGGAATTCTCATGGATGGCTCTGTCGTGGCTGTCAAAAATCTTCTCAACAACAAGGGTCAGGCAGAGAAAGAGTTTAAGGTGGAGGTTGAAGCCATTGGAAAAGTGAAACATAAGAATTTGGTGGGGTTAGTTGGATATTGCGCAGAAGGTGCTCAAAGGATGCTTGTTTATGAATATGTTGACAATGGAACATTGGAACAGTGGCTGCATGGTGATGTAGGACCTGCTAGCCCCTTGACATGGGATATAAGAATGAAGATTGCTGTTGGGACTGCAAAAGGGCTAGCCTACTTGCACGAAGGATTAGAACCCAAAGTTGTCCACCGAGATGTAAAATCCAGTAACATTCTTTTGGACAAAAAGTGGAATGCTAAAGTATCAGACTTTGGACTGGCCAAGCTCTTAGGGTCTGAGAAAAGCTATGTGACAACGCGCGTAATGGGGACATTCGGATATGTTTCACCTGAGTATGCAAGCACTGGTATGCTTAATGAGGGAAGCGATGTGTATAGTTTTGGGATTCTACTGATGGAGTTAATTACAGGAAGGAGTCCCATTGATTATTCTAGACCACCTGGAGAGATGAACTTGGTTGATTGGTTTAAGGGAATGGTTGCAAGTCGACATGGCGATGAGCTAGTTGATCCATTAATTGATATTCAGCCCTCTCCAAGATCTTTGAAGCGAGCTTTACTGGTTTGTCTGCGCTGTATAGACTTGGATGTCAGTAAGCGACCAAAGATGGGTCAAATTGTTCATATGCTTGAGGCTGATGATTTCCCCTTCCGTTCTGAACTTCGAACAAATAGAGAGAAAGATCCTGCTGCTTCCAGTAAGATTCCATATCCAACCAGGCATGTGGAGCCCGCAGATAAATCAAGCTGGAGATGA 1308 0.4763 MAASATSTGGALPELTNRTPLLGLKLYVLLLIVALIVIATVVLILVFVRRSRSSKKRKMRVKHSSGAIPLVSKEIVEVNTLELKIDPKKKEVEMEESASVESPNIGWGRWYSLKELENATEGFAEQNVIGEGGYGIVYKGILMDGSVVAVKNLLNNKGQAEKEFKVEVEAIGKVKHKNLVGLVGYCAEGAQRMLVYEYVDNGTLEQWLHGDVGPASPLTWDIRMKIAVGTAKGLAYLHEGLEPKVVHRDVKSSNILLDKKWNAKVSDFGLAKLLGSEKSYVTTRVMGTFGYVSPEYASTGMLNEGSDVYSFGILLMELITGRSPIDYSRPPGEMNLVDWFKGMVASRHGDELVDPLIDIQPSPRSLKRALLVCLRCIDLDVSKRPKMGQIVHMLEADDFPFRSELRTNREKDPAASSKIPYPTRHVEPADKSSWR* 436
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso4g0111 435 PANTHER OS03G0227900 PROTEIN 15 94 - -
Gso4g0111 435 PANTHER OS03G0227900 PROTEIN 96 411 - -
Gso4g0111 435 SUPERFAMILY Protein kinase-like (PK-like) 103 395 IPR011009 -
Gso4g0111 435 Gene3D Transferase(Phosphotransferase) domain 1 199 407 - -
Gso4g0111 435 MobiDBLite consensus disorder prediction 404 435 - -
Gso4g0111 435 Pfam Protein kinase domain 124 392 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso4g0111 435 Gene3D Phosphorylase Kinase; domain 1 81 198 - -
Gso4g0111 435 CDD STKc_IRAK 129 395 - -
Gso4g0111 435 SMART serkin_6 123 401 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso4g0111 435 ProSitePatterns Protein kinases ATP-binding region signature. 129 151 IPR017441 GO:0005524
Gso4g0111 435 ProSiteProfiles Protein kinase domain profile. 123 387 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso4g0111 435 ProSitePatterns Serine/Threonine protein kinases active-site signature. 245 257 IPR008271 GO:0004672|GO:0006468
Gso4g0111 435 PANTHER OS01G0323000 PROTEIN 96 411 - -
Gso4g0111 435 PANTHER OS01G0323000 PROTEIN 15 94 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso4g0111 Gso-Chr4 983987 987620 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso4g0111 13 390 Trihelix Transcription Factor Family AT1G68690 41.085 3.97e-94 295
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-V Gso4g0111 Pkinase 1.7e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso4g0111 - - gmx:100779420 755.362
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g0111 4 983987 987620 Gso4g0111 4 983987 987620 ECH