Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso4g0108 ATGGCCTCCAGCACTTTGAGCAAACAAAAGCCTTATGATTCGTGTTGGACCCCAAAACAGAACAAGGTGTTTGAAAAGGCACTTGCAAAGTATGACAAGGATACCCCTGACCGCTGGCACAATGTAGCCAAAGCAATTGGTGGTAAATCAGAAGATGATGTTAAGAGACACTATCAGATACTCTTGGAGGATCTCAGGCACATTGAGTCTGGCCATGTTCCCATTCCCAATTACAAATCAACACCAACTACCTTTCCTCTTTCAACAACACTCGCTTCTGAAGTATCTAAAGCTGAAATGGTTTGA 306 0.4314 MASSTLSKQKPYDSCWTPKQNKVFEKALAKYDKDTPDRWHNVAKAIGGKSEDDVKRHYQILLEDLRHIESGHVPIPNYKSTPTTFPLSTTLASEVSKAEMV* 102
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso4g0108 101 PANTHER MYB FAMILY TRANSCRIPTION FACTOR-RELATED 1 81 IPR044636 GO:0003700
Gso4g0108 101 Gene3D - 9 75 - -
Gso4g0108 101 ProSiteProfiles Myb-like domain profile. 16 62 IPR001005 -
Gso4g0108 101 SMART sant 12 64 IPR001005 -
Gso4g0108 101 PANTHER PROTEIN RADIALIS-LIKE 3 1 81 - -
Gso4g0108 101 CDD SANT 16 62 IPR001005 -
Gso4g0108 101 Pfam Myb-like DNA-binding domain 15 59 IPR001005 -
Gso4g0108 101 SUPERFAMILY Homeodomain-like 14 70 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso4g0108 Gso-Chr4 947183 948387 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Gso4g0108 Myb_DNA-binding 9.1e-07 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso4g0108 - - gmx:100805232 201.83
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g0108 4 947183 948387 Gso4g0108 4 947183 948387 ECH