Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso4g0089 ATGGCTTGTTCAAGTGGAACATCTTCAGGGGCGACGTCGTCGATGCTTCAAAATAACTCAGGTTCGGAGGAGGAGCTGCAGGCTCTGATGGAGCAGAGGAAGAGGAAGAGAATGATATCGAACCGCGAATCGGCTAGGCGATCTCGAATGAGGAAGCAGAAGCACTTGGATGATCTAGCATCGCAGGTGACTCAGCTCAGGAACGAGAACCACCAGATTCTCACATCGGTGAACCTCACTACCCAGAAGTACTTGGCGGTTGAGGCTGAGAACTCTGTTTTGAGAGCACAAGTGAACGAACTCAGCCACTGGTTGGAGTCTCTGAACGAGATCATCCACTTCTTGAATGCCACTGATGGTGGTCCACCACCACCACCAAGCTCCTTCTTTGAGCCCGATGCTACCTTCTTCAACAAGGCTTATCTGAGCCAGCCGATTATGGCTTCAGCAGACATGTTGCAGTACTGA 468 0.5107 MACSSGTSSGATSSMLQNNSGSEEELQALMEQRKRKRMISNRESARRSRMRKQKHLDDLASQVTQLRNENHQILTSVNLTTQKYLAVEAENSVLRAQVNELSHWLESLNEIIHFLNATDGGPPPPPSSFFEPDATFFNKAYLSQPIMASADMLQY* 156
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso4g0089 155 Coils Coil 49 69 - -
Gso4g0089 155 MobiDBLite consensus disorder prediction 1 57 - -
Gso4g0089 155 SMART brlzneu 29 93 IPR004827 GO:0003700|GO:0006355
Gso4g0089 155 MobiDBLite consensus disorder prediction 27 57 - -
Gso4g0089 155 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 36 51 IPR004827 GO:0003700|GO:0006355
Gso4g0089 155 CDD bZIP_plant_GBF1 34 84 IPR045314 GO:0003700|GO:0006355
Gso4g0089 155 PANTHER BZIP TRANSCRIPTION FACTOR 44 1 153 - -
Gso4g0089 155 SUPERFAMILY Leucine zipper domain 33 84 IPR046347 GO:0003700|GO:0006355
Gso4g0089 155 MobiDBLite consensus disorder prediction 1 26 - -
Gso4g0089 155 Gene3D - 31 86 - -
Gso4g0089 155 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 31 94 IPR004827 GO:0003700|GO:0006355
Gso4g0089 155 PANTHER BZIP TRANSCRIPTION FACTOR 1 153 - -
Gso4g0089 155 Pfam bZIP transcription factor 32 78 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso4g0089 Gso-Chr4 821673 822948 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso4g0089 27 155 bZIP Transcription Factor Family AT4G34590 56.835 3.64e-47 149
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Gso4g0089 bZIP_1 4.2e-11 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso4g0089 K25786 - gmx:778171 291.197
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g0089 4 821673 822948 Gso4g0089 4 821673 822948 ECH
Gso4g0089 4 821673 822948 Gso6g0080 6 813625 814707 GST