Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso4g0065 ATGGCTGCTGCGTCTAATCTCTCCACTCTCTCCTCCTCTTCCCTCTCCAAACCCTCGTCCTCTTTCCCTTTCCGCAACACACCAACAAACAACAACGCTTCTTTTCTCCACAACAAATCCCTTCCAAACCAAAACTCTCTCTCTCACAAACTCTCTTCCCCTCTGCCTCTCGCATGCAACCCAAAAAACCAAAACACTTGTGTCTTCTTCGACGACGAAGACCAAAAGCCCCGTGAAGAGTGCGGCGTGGTGGGCATCTACGGCGACCCGGAAGCCTCCCGTCTCTGCTCCCTGGCCCTCCACGCCCTCCAGCACCGCGGCCAAGAAGGTGCCGGCATCGTAGCCGTCCACGACAACCACCTCCAATCCGTCACCGGCGTCGGCCTCGTCTCCGACGTCTTCGACGAGTCCAAGCTCTCCCGCCTCCCCGGCACCTCGGCCATTGGCCACGTCCGCTACTCCACCGCCGGCCAATCCATGCTCAAAAACGTCCAACCCTTCCTGGCCGACTACCGCTTCGGCTCCGTCGCCGTCGCTCACAACGGCAACTTCGTCAACTACCGCTCCCTCCGAGCCAGACTCGAACACAACAACGGCTCCATCTTCAACACCACCTCCGACACCGAGGTTGTCCTCCACCTCATCGCCACTTCAAAACACAGGCCATTCCTCCTCAGAATCGTGGACGCCTGCGAGCATCTCCAAGGCGCCTACTCCCTCGTATTCGTCACGGAGGACAAGCTCGTCGCCGTCAGAGACCCCTTCGGGTTCCGACCCTTGGTGATGGGTAGGAGAACCAACGGCGCTGTAGTTTTGGCCTCCGAGACATGCGCGCTTGATTTAATCGAAGCCACGTACGAGAGAGAGGTGTACCCGGGTGAAGTTATCGTGGTGGACCACACTGGAATCCAATCCCTCTGCCTCGTGTCTCATCCTGAGCCAAAACAATGCATCTTCGAGCACATATACTTCGCGCTTCCTAACTCTGTTGTTTTCGGGAGGTCCGTGTACGAGTCTAGAAAAAAATTCGGAGAAATACTAGCCTCTGAGAGTCCCGTTGAGTGTGACGTTGTGATCGCGGTTCCTGATTCTGGCGTTGTGGCTGCGCTTGGTTATGCTGCAAAAGCTGGGGTACCCTTTCAGCAGGGGTTGATTAGGTCCCACTATGTAGGGAGGACTTTCATCGAGCCTTCGCAGAAAATTAGGGATTTTGGAGTGAAGCTTAAACTGTCTCCGGTTCATGCTGTGCTTGAAGGGAAGAGGGTTGTGGTTGTGGATGATTCCATCGTGAGAGGCACCACGTCGTCCAAGATTGTGAGGCTCTTGAAGGAGGCCGGTGCCAAGGAAGTTCACATGAGGATTGCATGTCCTCCTATTGTTGCTTCGTGTTATTATGGAGTTGACACACCCAGTTCAGAGGAGTTGATATCCAACCGGATGAGTGTGGAGGAGATAAGGAAGTTTATTGGGTCGGATTCGCTGGCTTTTCTTCCCTTGGATAAGTTGAAGACATTGTTAGGGGATGATGCTCTTAACTACTGCTATGCTTGCTTCTCTGGGAAGTACCCTGTTGAGCCTGAGGAACTTCAAATGAAGAGGCTTGGTGTTGCTCACTTCAATTGGGACGACGACTTCAATGGGAATTTCGAATCTATTGATGTGGGGGGTTGGGTTACAAATCAAGATGGGTTTAAGATTGGTAGTGTCTAA 1710 0.5351 MAAASNLSTLSSSSLSKPSSSFPFRNTPTNNNASFLHNKSLPNQNSLSHKLSSPLPLACNPKNQNTCVFFDDEDQKPREECGVVGIYGDPEASRLCSLALHALQHRGQEGAGIVAVHDNHLQSVTGVGLVSDVFDESKLSRLPGTSAIGHVRYSTAGQSMLKNVQPFLADYRFGSVAVAHNGNFVNYRSLRARLEHNNGSIFNTTSDTEVVLHLIATSKHRPFLLRIVDACEHLQGAYSLVFVTEDKLVAVRDPFGFRPLVMGRRTNGAVVLASETCALDLIEATYEREVYPGEVIVVDHTGIQSLCLVSHPEPKQCIFEHIYFALPNSVVFGRSVYESRKKFGEILASESPVECDVVIAVPDSGVVAALGYAAKAGVPFQQGLIRSHYVGRTFIEPSQKIRDFGVKLKLSPVHAVLEGKRVVVVDDSIVRGTTSSKIVRLLKEAGAKEVHMRIACPPIVASCYYGVDTPSSEELISNRMSVEEIRKFIGSDSLAFLPLDKLKTLLGDDALNYCYACFSGKYPVEPEELQMKRLGVAHFNWDDDFNGNFESIDVGGWVTNQDGFKIGSV* 570
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso4g0065 569 Pfam Glutamine amidotransferase domain 159 279 IPR017932 -
Gso4g0065 569 SUPERFAMILY N-terminal nucleophile aminohydrolases (Ntn hydrolases) 81 305 IPR029055 -
Gso4g0065 569 ProSiteProfiles Glutamine amidotransferase type 2 domain profile. 81 301 IPR017932 -
Gso4g0065 569 PANTHER AMIDOPHOSPHORIBOSYLTRANSFERASE 33 558 - -
Gso4g0065 569 Pfam Phosphoribosyl transferase domain 344 452 IPR000836 -
Gso4g0065 569 Hamap Amidophosphoribosyltransferase [purF]. 80 522 IPR005854 GO:0004044|GO:0009113
Gso4g0065 569 CDD PRTases_typeI 344 455 IPR000836 -
Gso4g0065 569 PANTHER AMIDOPHOSPHORIBOSYLTRANSFERASE 2, CHLOROPLASTIC 33 558 - -
Gso4g0065 569 Gene3D - 341 505 IPR029057 -
Gso4g0065 569 CDD GPATase_N 81 332 IPR035584 -
Gso4g0065 569 MobiDBLite consensus disorder prediction 1 41 - -
Gso4g0065 569 TIGRFAM purF: amidophosphoribosyltransferase 81 523 IPR005854 GO:0004044|GO:0009113
Gso4g0065 569 SUPERFAMILY PRTase-like 317 528 IPR029057 -
Gso4g0065 569 Gene3D Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 81 523 IPR029055 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso4g0065 Gso-Chr4 570042 572027 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso4g0065 71 558 PRT Gene Family AT2G16570 80.777 0.0 798
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso4g0065 K00764 - gmx:548065 1111.67
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g0065 4 570042 572027 Gso4g0065 4 570042 572027 ECH