Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso4g0059 ATGGGTTTCAGTTTGCGTGGTCTTCAAAGGCGTGTGGATGTCCCAAAGGGCAGTGTAGCAGTGTATGTAGGAGAAAGCCAAAAGAAGCGCTTTGTGGTTCCCATATCATACTTGAACCAACCTTCATTTCTTGAGTTGCTGAGTCAAGCTGAGCAAGAATTTGGATTTGATCATCCAATGGGTGGCCTCACACTTCCTTACACAGAAGAAGTCTTCCTGGATGTCACTTCTCGCTTGCACAGGCGATAA 249 0.4618 MGFSLRGLQRRVDVPKGSVAVYVGESQKKRFVVPISYLNQPSFLELLSQAEQEFGFDHPMGGLTLPYTEEVFLDVTSRLHRR* 83
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso4g0059 82 Pfam Auxin responsive protein 11 78 IPR003676 GO:0009733
Gso4g0059 82 PANTHER SAUR-LIKE AUXIN-RESPONSIVE FAMILY PROTEIN 6 80 - -
Gso4g0059 82 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 6 80 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso4g0059 Gso-Chr4 518953 519585 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso4g0059 13 72 Calmodulin-binding Proteins AT5G20810 53.333 7.72e-14 61.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso4g0059 K14488 - gmx:106798359 166.392