Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso4g0057 ATGGGTATTCGTCTGCCAATATTCATGGCTCTTCATGCCAACAAGATGTTCAAGTGGCAGCAGCATCTCCATAGTAGAAACCACTCGAATGTTCCAAAGGGCCACATAGCAGTGTATGTTGGAGAGGCTCAAAAGAAAAGGTTTGTGGTTCCAATATCTTACTTGAACCATCCTTCGTTTGTTGACTTGCTAAACCGAGCTGAGGAAGAGTTTGGCTACAATCATCCAATGGGCGGTCTCACAATCCCTTGTAAAGAAGAGGCATTCATCACTCTCACCTCTCAACTACGTGCCTCCTGA 300 0.4533 MGIRLPIFMALHANKMFKWQQHLHSRNHSNVPKGHIAVYVGEAQKKRFVVPISYLNHPSFVDLLNRAEEEFGYNHPMGGLTIPCKEEAFITLTSQLRAS* 100
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso4g0057 99 Pfam Auxin responsive protein 18 94 IPR003676 GO:0009733
Gso4g0057 99 PANTHER AUXIN-RESPONSIVE PROTEIN SAUR21-LIKE 1 98 - -
Gso4g0057 99 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 1 98 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso4g0057 Gso-Chr4 512795 513402 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso4g0057 30 89 Calmodulin-binding Proteins AT5G20810 55.000 2.61e-16 68.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso4g0057 K14488 - gmx:102663761 208.379