Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso4g0040 ATGATGGGCATTGAATCGACGGGGAGTAAATGGCTTGGGTTGGTGGCGGCGGTGTGGATACAAGCAATCTCCGGCAACAACTACACTTTCTCGAATTACTCGGACGCTCTGAAATCCCTCATGAGCCTAACCCAAATCGAGCTCAACAATCTGTCCGTGGCCAAGGATGTTGGCAAGGCTTTTGGGCTTCTGGCTGGGCTGGCCTCAGACAAATTCCCGACTTGGGCCATTCTCCTCATTGGGTCCCTCCAAGGCCTTATCGGCTATGGCGTCCAGTGGCTCGTCGTCAGCCAGAGAATCCAACCCCTCCCATACTGGCAGATGTGCGTATTCCTCTGCATTGGTGGCAACAGCACTACCTGGATGAACACCGCCGTTCTAGTCACATGCATCCGCAACTTCCGCCGCAACAGAGGCCCCGTTTCCGGCATTCTCAAAGGCTTTGTCGGTTTGAGCACCGCCATATTCACCGACCTCTGTTCCGCTCTCTTCGCCGACGACCCTGCTTCCTTTCTCCTCATGCTCGCCCTCATCCCTTTCGCCGTTTGCCTCTCCGGAATGTTTTTCCTCCGTGAGATTCCTCCCGCCGCCACCAACGACCAGGAAGAGTCTACTTATTTCGCGGTTTTCAACGCGGTTGCCGTGGTCGTCGCCGTTTACCTCTTGGCTTTCGGGTTCGTGCCGAACCCTAGCGCTCTGGTGTCTCGGGCATTCGCCGTGGTTTTGCTACTTCTGTTGGTGGCGCCGATGGGAATCCCGGTCCACTCTTACTTGAAGGCACGAAGGCAGGACGAGCGGTTCAAACCGAATTTGGAGGAGCGGGTTGACGAACCGTTGATTCGCGGAAAAGAGAAGGGGAGTGAAAGTGAGGTGGAGAGAGGGAATGTATTAGCGGAAGAGGCGGCGGCGGAGGGAATGAGTGGACCGGCGGTGGGGGAGGAGCACACGATATGGGAGGCTCTGAAAACGGTGGATTTTTGGATTTTGTTTGTTTCGTTTCTCTGTGGGGTTGGAACGGGTTTGGCGGTTATGAATAATATGGGTCAAATCGGTTTGGCGCTGGGTTATTCGGATGTGTCTCTCTTTGTATCCTTGACTAGTATTTGGGGCTTCTTCGGTCGGATCGTCTCGGGTTCGGTTTCGGAGCACTTCATCAAGAAAGCTGCAACTCCTAGACCACTTTGGAATGCAGCCTCTCAAATTCTGATGGCGGTGGGATACATACTCCTGGCAATGGCTATGCCAGGTTCCCTTTACATAGGGTCCGTTGTGGTTGGCATATGCTACGGGGTGAGGCTTGCCATTACTGTGCCAACTGCCTCGGAGTTATTCGGCCTCAAATATTATGGTCTTATATACAACATTCTCATTCTTAACCTTCCCCTTGGCTCTTTCCTCTTTTCTGGTCTTCTTGCTGGCATTCTGTATGATATGGAGGCGACTACCACCGTAGGAGGAGGCAACACTTGTATTGGAGCTCATTGCTACAGACTAGTATTCATCATCATGGCTGTAGCTTGTGTTGTTGGCTTCTTCTTAGACATTTTATTGTCATTCAGAACTAAGAAGGTTTACAACAAGATCTCCTCCAGCAAAAACTCCAACAAAAACTCTCTGAATTCAAGTAGGCGATGA 1635 0.5187 MMGIESTGSKWLGLVAAVWIQAISGNNYTFSNYSDALKSLMSLTQIELNNLSVAKDVGKAFGLLAGLASDKFPTWAILLIGSLQGLIGYGVQWLVVSQRIQPLPYWQMCVFLCIGGNSTTWMNTAVLVTCIRNFRRNRGPVSGILKGFVGLSTAIFTDLCSALFADDPASFLLMLALIPFAVCLSGMFFLREIPPAATNDQEESTYFAVFNAVAVVVAVYLLAFGFVPNPSALVSRAFAVVLLLLLVAPMGIPVHSYLKARRQDERFKPNLEERVDEPLIRGKEKGSESEVERGNVLAEEAAAEGMSGPAVGEEHTIWEALKTVDFWILFVSFLCGVGTGLAVMNNMGQIGLALGYSDVSLFVSLTSIWGFFGRIVSGSVSEHFIKKAATPRPLWNAASQILMAVGYILLAMAMPGSLYIGSVVVGICYGVRLAITVPTASELFGLKYYGLIYNILILNLPLGSFLFSGLLAGILYDMEATTTVGGGNTCIGAHCYRLVFIIMAVACVVGFFLDILLSFRTKKVYNKISSSKNSNKNSLNSSRR* 545
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso4g0040 544 Pfam Nodulin-like 10 254 IPR010658 -
Gso4g0040 544 CDD MFS_Mch1p_like 9 510 - -
Gso4g0040 544 PANTHER PROTEIN NUCLEAR FUSION DEFECTIVE 4-LIKE 5 537 - -
Gso4g0040 544 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 5 537 - -
Gso4g0040 544 SUPERFAMILY MFS general substrate transporter 26 523 IPR036259 -
Gso4g0040 544 Gene3D MFS general substrate transporter like domains 314 543 IPR036259 -
Gso4g0040 544 Gene3D MFS general substrate transporter like domains 9 269 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso4g0040 Gso-Chr4 391726 394761 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso4g0040 10 540 Nodulin-like Gene Family AT4G34950 69.245 0.0 788
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso4g0040 - - gmx:100813607 954.125
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g0040 4 391726 394761 Gso4g0040 4 391726 394761 ECH