Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso4g0038 ATGCGACTCAGCATTGTGGGTATCGAAGCAATGCATAGAGCGATCTCGTTTCTCATTCAACCGCGATGCCTCCTTCTCATAGTTGTTCTCTCAATTTTCTTGATTCTCGCATTATCTGGTTCCAAACGAGTTGAAGAGAAAGAAGAAGAACTTGAAATTACAGATAGAGTATTCTTGGATGTTGATATTGATGGACAGCGTCTAGGTAGGATTCTCATTGGATTATATGGCAAAGTTGTACCAAAAACTGTGGGGGAGAAAGGAAAGAATGCCAGTGGTGTAAAACTTCATTACAAAGGAATACCATTTCATAGGATAATATCAGGTTTCATGATTCAGGGCGGTGACATTGTTCATCATGATGGTAGAGGATATGAATCAATTTATGGTGGCACTTTTCCTGATGAGAATTTCAAGATAAACCATTCTAATGCTGGTGTAGTCTCTATGGTGAATTCAGGTCCTGATTCCAATGGCTCACAGTTTTTTATTACAACAGTGAAGACCGCTTGGTTAGATGGAGAACATGTTGTTTTTGGCAAGGTTGTCCAAGGCATGGATACTGTGTTTGCAATTGAAGGGGGTGCTGGAACCTACAATGGGAAACCCAGAAAGAAGGTAGTTATTGCAGACTCTGGAGAGATACCCAAGAGCCAGTGGGATATGGAAAGATGA 675 0.4089 MRLSIVGIEAMHRAISFLIQPRCLLLIVVLSIFLILALSGSKRVEEKEEELEITDRVFLDVDIDGQRLGRILIGLYGKVVPKTVGEKGKNASGVKLHYKGIPFHRIISGFMIQGGDIVHHDGRGYESIYGGTFPDENFKINHSNAGVVSMVNSGPDSNGSQFFITTVKTAWLDGEHVVFGKVVQGMDTVFAIEGGAGTYNGKPRKKVVIADSGEIPKSQWDMER* 225
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso4g0038 224 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 35 223 - -
Gso4g0038 224 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 75 90 IPR002130 GO:0000413|GO:0003755
Gso4g0038 224 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 103 115 IPR002130 GO:0000413|GO:0003755
Gso4g0038 224 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 146 161 IPR002130 GO:0000413|GO:0003755
Gso4g0038 224 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 161 173 IPR002130 GO:0000413|GO:0003755
Gso4g0038 224 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 174 189 IPR002130 GO:0000413|GO:0003755
Gso4g0038 224 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 35 223 - -
Gso4g0038 224 Gene3D - 42 221 IPR029000 -
Gso4g0038 224 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 58 214 IPR002130 GO:0000413|GO:0003755
Gso4g0038 224 SUPERFAMILY Cyclophilin-like 53 215 IPR029000 -
Gso4g0038 224 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 61 212 IPR002130 GO:0000413|GO:0003755
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso4g0038 Gso-Chr4 380774 385394 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso4g0038 69 212 U-box Gene Family AT5G67530 40.397 2.05e-23 95.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso4g0038 - - gmx:100808240 421.779
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g0038 4 380774 385394 Gso4g0038 4 380774 385394 ECH