Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso4g0007 ATGGAGGGCTCAAAGGAAAACTGTGTGCCTCGGATTCCGCTCATACCCTCTTCAAATCTTCAAGAAGGTCCAAGAATGAAGCCTCTCCTCCATCACCGGCTGCCTCTCGGCAACATCAGTCAGAATGTTAATATGCCTCATTCTCAAGTCAACAAACTAGATCTTTCCCGCAAGTGTACGGCTCACACAATTCAGCACCACTTCCCTCAAGAAACTAAGAAACAGAACCTGTTGGCCCCGAACCCGAGTTGCAAGTTAGACTGTGATATCGTAGATATTGATGATGACGATGGGGATGGCAGTGACGATGCCGTTCCAGTATTTGTCAAGCACACTGAAGCCATGCTTGATGAAATTGACAAGATAGAGGAAGTTGAAATGGAAGATGTGGAGGAGGAACCTGTTTTGGACATCGATGCCTGTGATAGGAAAGATCCACTTGCAGTGGTTGAGTACATAGATGATATATACAGTTTCTACAAGGACATTGAGAATTCGAGCTGTGTCTCTCCAAATTACATGACTAGTCAACTTGACATTAATGAGAGGATGAGGGCAATTCTTATTGACTGGCTTATTGAGGTTCACTACAAATTTGAGCTTTTGGAGGAGACGTTGTTCCTTACTGTCAATCTCATAGACAGGTTCTTGGAGCGTCAGGCAGTGATCAGAAATAAACTTCAGTTAGTTGGTGTAACAGCTATGCTAATAGCTTGTAAGTATGAGGAGGTCACAGTTCCTACCGTTGAGGATTTTATTCTGATAACAGACAAGGCATATACAAGAAATGAGGTTTTAGATATGGAGAAATTAATGATGAACATCTTGCAATTCAAGCTGTCTATGCCTACTCCATACATGTTCATGAGAAGATTTCTTAAGGCAGCTCATTCTGATAAAAAGCTGGAGCTCTTGTCCTTCTTCTTGGTCGAGCTTTGCTTGGTAGAATGCAAAATGCTGAAGTTTTCACCATCTTTGCTGGCTGCTGCTGCCATTTACACAGCTCAATGTAGTCTGTACCAGTTTAAGCAATGGACTAAGACCACCAAGTGGTACACTGATTACTCAGAAGAGAAGCTTCTCGAATGCTCAAGGCTGATGGTTACTTTCCATCAGAAAGCTGGATCAGGGAAACTCACCGGTGTATATAGAAAGTACAATACATGGAAGTATGGCTGTGCCGCGAAAATAGAACCAGCCCTGTTTCTACTGGATAATTAA 1221 0.4267 MEGSKENCVPRIPLIPSSNLQEGPRMKPLLHHRLPLGNISQNVNMPHSQVNKLDLSRKCTAHTIQHHFPQETKKQNLLAPNPSCKLDCDIVDIDDDDGDGSDDAVPVFVKHTEAMLDEIDKIEEVEMEDVEEEPVLDIDACDRKDPLAVVEYIDDIYSFYKDIENSSCVSPNYMTSQLDINERMRAILIDWLIEVHYKFELLEETLFLTVNLIDRFLERQAVIRNKLQLVGVTAMLIACKYEEVTVPTVEDFILITDKAYTRNEVLDMEKLMMNILQFKLSMPTPYMFMRRFLKAAHSDKKLELLSFFLVELCLVECKMLKFSPSLLAAAAIYTAQCSLYQFKQWTKTTKWYTDYSEEKLLECSRLMVTFHQKAGSGKLTGVYRKYNTWKYGCAAKIEPALFLLDN* 407
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso4g0007 406 Pfam Cyclin, N-terminal domain 155 281 IPR006671 -
Gso4g0007 406 PANTHER CYCLIN-B2-3-RELATED 60 401 - -
Gso4g0007 406 SMART cyclin_7 190 274 IPR013763 -
Gso4g0007 406 SMART cyclin_7 287 369 IPR013763 -
Gso4g0007 406 MobiDBLite consensus disorder prediction 1 20 - -
Gso4g0007 406 ProSitePatterns Cyclins signature. 185 216 IPR006671 -
Gso4g0007 406 SUPERFAMILY Cyclin-like 144 280 IPR036915 -
Gso4g0007 406 Pfam Cyclin, C-terminal domain 283 399 IPR004367 -
Gso4g0007 406 SMART Cyclin_C_2 283 400 IPR004367 -
Gso4g0007 406 CDD CYCLIN 184 273 IPR013763 -
Gso4g0007 406 Gene3D - 155 396 - -
Gso4g0007 406 Gene3D - 169 281 - -
Gso4g0007 406 PANTHER CYCLINS 60 401 IPR039361 -
Gso4g0007 406 SUPERFAMILY Cyclin-like 282 399 IPR036915 -
Gso4g0007 406 CDD CYCLIN 283 368 IPR013763 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso4g0007 Gso-Chr4 102722 105427 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso4g0007 55 404 Core Cell Cycle Gene Families AT1G20610 62.079 2.04e-159 454
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso4g0007 K21777 - gmx:100819848 762.296
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g0007 4 102722 105427 Gso4g0007 4 102722 105427 ECH
Gso4g0007 4 102722 105427 Gso6g0006 6 112739 115605 GST