Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g2245 ATGGGTTCTCCCTCCCACTCTCACATCATCATTCTGTTTGTGCTCTCTTTAGCCTCAGCCTCCGCTTGGGAAGTAGAGAAGAAGACAACATACATAGTGCAAGTCCAGCACGAAGCAAAGCCTTCCATTTTCCCCACGCACAGGCACTGGTACCAGTCTTCCCTTGCCGACACCACCGCCTCCGTTATTCACACCTACCAAACAGTCTTCCACGGATTCTCAGCGAGGCTCTCCCCCGCGGAGGCACACAAGCTGCACTCACTCTCCCACGTCATAACCCTCATTCCTGAACAGGTACGCCAACTCCACACCACGCGCTCCCCTCAGTTCCTGGGCCTCAACACTGCCGACAGGGATGGCCTTCTCAAGGAGACCGATTTCGGCTCCGATCTCGTCATCGGAGTCATCGACACTGGCATTTCCCCCGACAGCCAGAGCTTCAACGACCGCGATCTCGCTCTTCCTCCCCCTAAGTGGAAGGGCAACTGCGTTGCTGCTAAAGACTTTCCCCCCACCTCCTGTAACCGTAAACTCATCGGAGCTCGCTACTTCTGCGCCGGTTACGAAGCCACCAACGGCAAAATGAACGACACTTTGGAGTCCCGCTCTCCCAGAGACTCCGACGGTCACGGCACCCACACGGCCTCCATTGCCGCCGGAAGGTACGTCTTCCCTGCCTCCACCATGGGCTACGCCAGAGGAATGGCCGCCGGGATGGCTCCCAAGGCTCGCCTCGCCGTCTACAAGGTCTGCTGGAATGCCGGCTGCTACGACTCCGACATCCTAGCCGCATTCGACGCCGCTGTGACGGACGGCGTCGACGTGATCTCCCTCAGCGTCGGGGGCGCGGTGGTGCCCTACCACCTCGACGCCATCGCCGTCGGGGCCTTCGGAGCCTCCGAGGCTGGCGTCTTCGTGTCTGCCTCCGCGGGAAACGGCGGTCCCGGCGGCCTCACCGTCACCAATGTGGCCCCCTGGGTCACCACTGTGGGCGCCGGAACCATAGACAGAGATTTCCCGGCGGATGTTATGCTGGGGAACGGCAAGGTGATTGGCGGGGTGAGTGTGTACGGTGGACCGGGTCTGACTCCGAGTCGGCTCTATCCTCTGGTGTATGCGGGTTCGGATGGTTACTCCTCCTCTCTTTGCTTGGAAGATTCGTTGGATCCAAAGTCTGTGAGGGGGAAGATTGTCGTGTGTGACAGAGGGGTCAATTCGAGAGCCGCAAAAGGTGAAGTGGTGAAGAAGGCGGGAGGAGTTGGAATGATTTTGACGAATGGACCCTTCGACGGGGAAGGTTTGGTGGCTGACTGCCATGTCCTCCCAGCGACCTCCGTGGGTGCCGGGGGCGGGGATGAGCTTCGGAGATACATGTCCTTGGCCTCACAGCTGCGGTCACCAGCCACGGCAACCATAATATTCAAGGGCACAAGGCTCGGGATTAAACCAGCGCCCAAGGTGGCATCTTTTTCGGCGAGAGGGCCAAACCCGGAGTCCCCCGAGATCCTGAAGCCGGATGTGATAGCTCCTGGATTGAACATTCTTGCGGCCTGGCCCAGTACACTTGCTCCTTCTGGAGTTCCCTCTGATGAGCGTAGGAGTGAGTTTAACATTCTGTCGGGCACTTCAATGGCTTGCCCCCACGTTTCTGGTTTGGCTGCTCTGTTGAAAGCGGCACATCCGGATTGGAGTCCTGCTGCCATCCGATCTGCCCTCATCACTACTGCTTACACTCTTGACAATGGAGGAGGCCCTATGCTCGATGAGTCTAATGCCAATGTTTCCTCCGTCTTTGATTATGGGGCTGGCCATGTTCATCCCGACAGTGCCATCAACCCTGGCCTGGTCTATGACATCTCTACCTACGATTATGTCGATTTCCTCTGCAATTCCAACTATACCTCCCACAACATCCGAGTTATCACCCGAAACCAGGCTTCAGACTGCAGTGGGGCCAAGAGGGCTGGTCACTCTGGGAATCTTAACTATCCTTCTTTATCTGCCGTCTTTCAACAGTATGGAAAGCAGCACATGTCCACACACTTTATTAGAACTGTCACCAATGTTGGAGACCCCAACTCGCTCTACACACTCACTATTGCACCCCCTCCCGGCACCGAGGTCACGGTTGAACCGGACACGCTGGCTTTCAGGAGGTTGGGTCAGAAATTGAACTTCCTTGTTAGGGTGCAAACCAGGGCAGTTAAGCTTTCCCCTGGTAGTTCTACTGTCAAGACTGGTTCCATTGTCTGGTCTGATACCAAGCACACTGTCACAAGTCCCTTGGTTGTCACCATGCAGCAACCTCTCTAG 2313 0.5681 MGSPSHSHIIILFVLSLASASAWEVEKKTTYIVQVQHEAKPSIFPTHRHWYQSSLADTTASVIHTYQTVFHGFSARLSPAEAHKLHSLSHVITLIPEQVRQLHTTRSPQFLGLNTADRDGLLKETDFGSDLVIGVIDTGISPDSQSFNDRDLALPPPKWKGNCVAAKDFPPTSCNRKLIGARYFCAGYEATNGKMNDTLESRSPRDSDGHGTHTASIAAGRYVFPASTMGYARGMAAGMAPKARLAVYKVCWNAGCYDSDILAAFDAAVTDGVDVISLSVGGAVVPYHLDAIAVGAFGASEAGVFVSASAGNGGPGGLTVTNVAPWVTTVGAGTIDRDFPADVMLGNGKVIGGVSVYGGPGLTPSRLYPLVYAGSDGYSSSLCLEDSLDPKSVRGKIVVCDRGVNSRAAKGEVVKKAGGVGMILTNGPFDGEGLVADCHVLPATSVGAGGGDELRRYMSLASQLRSPATATIIFKGTRLGIKPAPKVASFSARGPNPESPEILKPDVIAPGLNILAAWPSTLAPSGVPSDERRSEFNILSGTSMACPHVSGLAALLKAAHPDWSPAAIRSALITTAYTLDNGGGPMLDESNANVSSVFDYGAGHVHPDSAINPGLVYDISTYDYVDFLCNSNYTSHNIRVITRNQASDCSGAKRAGHSGNLNYPSLSAVFQQYGKQHMSTHFIRTVTNVGDPNSLYTLTIAPPPGTEVTVEPDTLAFRRLGQKLNFLVRVQTRAVKLSPGSSTVKTGSIVWSDTKHTVTSPLVVTMQQPL* 771
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g2245 770 Gene3D Peptidase S8/S53 domain 130 624 IPR036852 GO:0004252|GO:0006508
Gso3g2245 770 SUPERFAMILY Subtilisin-like 102 615 IPR036852 GO:0004252|GO:0006508
Gso3g2245 770 Pfam Peptidase inhibitor I9 30 103 IPR010259 -
Gso3g2245 770 Pfam Fibronectin type-III domain 660 764 IPR041469 -
Gso3g2245 770 Pfam Subtilase family 128 585 IPR000209 GO:0006508|GO:0008236
Gso3g2245 770 PANTHER SUBTILISIN-LIKE PROTEASE SBT1.5 11 770 - -
Gso3g2245 770 CDD PA_subtilisin_like 345 459 - -
Gso3g2245 770 ProSitePatterns Serine proteases, subtilase family, serine active site. 541 551 IPR023828 -
Gso3g2245 770 Gene3D - 336 480 - -
Gso3g2245 770 ProSitePatterns Serine proteases, subtilase family, aspartic acid active site. 133 143 IPR023827 -
Gso3g2245 770 ProSiteProfiles Serine proteases, subtilase domain profile. 107 611 - -
Gso3g2245 770 PRINTS Subtilisin serine protease family (S8) signature 128 147 IPR015500 -
Gso3g2245 770 PRINTS Subtilisin serine protease family (S8) signature 206 219 IPR015500 -
Gso3g2245 770 PRINTS Subtilisin serine protease family (S8) signature 540 556 IPR015500 -
Gso3g2245 770 SUPERFAMILY PA domain 368 454 IPR046450 -
Gso3g2245 770 CDD Peptidases_S8_3 101 577 IPR034197 -
Gso3g2245 770 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN-RELATED 11 770 - -
Gso3g2245 770 Pfam PA domain 368 454 IPR003137 -
Gso3g2245 770 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 16 103 IPR037045 -
Gso3g2245 770 Gene3D - 628 767 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g2245 Gso-Chr3 47596050 47598949 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso3g2245 30 770 Subtilisin-like Serine Gene Family AT3G14240 76.000 0.0 1159
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso3g2245 - - gmx:100784180 1535.01