Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g2244 ATGTGGTGGAGATCAGCATCTTTCATCATGGACAGGCAGCGGAACGAGGAGGCTGATCTGAAGGGGGACTCCTCAAACCCTAACCCTAACCCTAATATCTCTGCCTACTATGAGACGAGAGCGGCGCACCACGGCGTGGTCACCAGCGACTGGCTGGCCCAGGCTCAGGCCGCTATTGGGCCCGACCCCGACCCCAACCCTGAACCTGAACCTCAACTCAGGCCCGATCCTGACAAGCCCTTCAGTGTCATCGATGAGTTTAACAGCTGGCGGAAACAGCCCCATTTGGCCGAGGCCGTCGCCGCCATTCGGGCCCTGGCCGCCGTCATAAGGTCCAGCAAGGCTACCACCATGATGCAGCTCGAGATTGAGCTCAAGAAGGCCTCCGATTTTCTCAAGTCTTGGGATACCACCTCTATCTCTCTGACAGCCGGCTGTGATCTCTTTATGCGATATGTCACTCGGACTTCTGCTTTAGAATACGAAGACTTCAATTCCGCTAAGTCTCGCTTGATCGAGCGCGCTGAGAAGTTTGGAGAAATCTCCTACAAGGCCCGCAAAGTTATTGCAATGTTGAGTCAGGATTTTATATTTGATGGCTGCACAATTTTGGTTCATGGTTTTTCCAGAGTTGTCTTTGAAGTCCTAAAACTTGCTGCACAAAATAACAAACTATTTCGGGTCTTCTGCACAGAGGGAAGACCAGACCGAACAGGTTTGCGGTTGTCGAATGAGCTGGCCAAACTTGATGTTTCAGTGAAACTTCTAATAGATTCTGCTGTTGCATATACTATGGATGAGGTGGACATGGTTTTTGTGGGTGCGGATGGAGTTGTCGAAAGTGGGGGCATAATCAACATGATGGGGACCTATCAAATAGCATTGGTTGCTCACAGTATGAATAAACCAGTTTATGTCGCTGCTGAGAGCTACAAGTTTGCTCGCCTTTACCCTCTTGACCAAAAGGATTTAGCCCCTGCATTACGCCCTATTGATTTTGGCGTACCTATTCCATCGAAGGTTGAGGTTGAAAGGTCCGCGCGGGACTACACCCCTCCTCAATACCTGACTCTGCTTTTCACAGATTTAGGTGTTCTTACTCCATCTGTCGTTAGTGATGAGCTCATCCAGCTATACTTATAG 1143 0.4969 MWWRSASFIMDRQRNEEADLKGDSSNPNPNPNISAYYETRAAHHGVVTSDWLAQAQAAIGPDPDPNPEPEPQLRPDPDKPFSVIDEFNSWRKQPHLAEAVAAIRALAAVIRSSKATTMMQLEIELKKASDFLKSWDTTSISLTAGCDLFMRYVTRTSALEYEDFNSAKSRLIERAEKFGEISYKARKVIAMLSQDFIFDGCTILVHGFSRVVFEVLKLAAQNNKLFRVFCTEGRPDRTGLRLSNELAKLDVSVKLLIDSAVAYTMDEVDMVFVGADGVVESGGIINMMGTYQIALVAHSMNKPVYVAAESYKFARLYPLDQKDLAPALRPIDFGVPIPSKVEVERSARDYTPPQYLTLLFTDLGVLTPSVVSDELIQLYL* 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g2244 380 PANTHER NAGB/RPIA/COA TRANSFERASE-LIKE SUPERFAMILY PROTEIN 32 380 - -
Gso3g2244 380 MobiDBLite consensus disorder prediction 57 80 - -
Gso3g2244 380 Pfam Initiation factor 2 subunit family 95 368 IPR000649 GO:0044237
Gso3g2244 380 PANTHER TRANSLATION INITIATION FACTOR EIF-2B SUBUNIT ALPHA 32 380 - -
Gso3g2244 380 SUPERFAMILY NagB/RpiA/CoA transferase-like 95 379 IPR037171 -
Gso3g2244 380 Gene3D - 183 380 IPR042529 -
Gso3g2244 380 Gene3D - 80 181 IPR042528 -
Gso3g2244 380 MobiDBLite consensus disorder prediction 14 34 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g2244 Gso-Chr3 47590316 47592519 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso3g2244 1 380 Eukaryotic Initiation Factors Gene Family AT1G53880 78.880 0.0 595
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso3g2244 K03239 - gmx:100799015 714.916