Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g2234 ATGGCTTCCGCTTGTGCTTCCTCTGCAATTACAGCTGTTGCCATCTCTACGCCGAGTTCCGGGCAGAAGAATGGATCAGGAGGTTGTTTTCTTAGTGGAAGGAAATTGAGGGTGAAAAAGGAGAGAGCAGCAATTGGAGGACGATCGATGGGCACTACAGTGTGCGCAGTTGCTGAGCCTGACAGACCTCTATGGTTCCCAGGCAGCACCCCTCCTCCATGGCTTGATGGCACTCTACCTGGAGACTTCGGCTTTGACCCTCTTGGTCTTGGATCTGACCCGGAGAGTCTGAGATGGAATGTTCAGGCAGAGCTAGTGCACTGCAGATGGGCAATGTTGGGTGCTGCTGGCATTTTCATTCCAGAATTCCTAACAAAGATTGGTGTCTTGAACACTCCTTCATGGTACTCAGCTGGAGAGCTGGAATACTTCACGGACACTACTACCCTCTTCATAGTTGAGCTCTTTTTCATTGGCTGGGCCGAGGGTAGAAGATGGGCTGACATAATCAAGCCAGGCTGTGTCAACACTGACCCCATCTTTCCCAACAACAAGCTCACCGGAACCGATGTGGGTTACCCTGGTGGCCTTTGGTTTGACCCCCTTGGTTGGGGAACCGGTTCTCCTCAGAAGATCAAGGACTTGAGAACTAAGGAGATCAAGAATGGCAGACTGGCCATGCTTGCTGTCATGGGTGCATGGTTCCAGCACATCTACACTGCCACCGGTCCTATTGACAACCTCTTTGCCCACCTTGCAGATCCTGGCCATGCTACCATTTTTGCTGCTTTCACCCCTAAGTGA 804 0.5162 MASACASSAITAVAISTPSSGQKNGSGGCFLSGRKLRVKKERAAIGGRSMGTTVCAVAEPDRPLWFPGSTPPPWLDGTLPGDFGFDPLGLGSDPESLRWNVQAELVHCRWAMLGAAGIFIPEFLTKIGVLNTPSWYSAGELEYFTDTTTLFIVELFFIGWAEGRRWADIIKPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGTGSPQKIKDLRTKEIKNGRLAMLAVMGAWFQHIYTATGPIDNLFAHLADPGHATIFAAFTPK* 268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g2234 267 Pfam Chlorophyll A-B binding protein 71 237 IPR022796 -
Gso3g2234 267 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 1 267 IPR001344 GO:0009765|GO:0016020
Gso3g2234 267 PANTHER CHLOROPHYLL A-B BINDING PROTEIN, CHLOROPLASTIC 1 267 - -
Gso3g2234 267 SUPERFAMILY Chlorophyll a-b binding protein 59 265 - -
Gso3g2234 267 Gene3D Chlorophyll a/b binding protein domain 72 257 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g2234 Gso-Chr3 47503473 47504816 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso3g2234 48 267 Chloroplast and Mitochondria Gene Families AT3G61470 85.909 2.32e-144 403
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso3g2234 K08908 - gmx:100794944 550.051