Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g2223 ATGTCGCTCGGAGAAACTGCTTGTTCATACGCAGCTCTCATCCTTCATGAAGATGGAATTAGTGTAACTGCTGACAAGATCAGCACCTTGTTGAAAACTGCAAAGGTTCCAGTAGACTCTTATTGGCCAACCTTGTTTGCTAAACTTGCTGAGAAGAAAAATCTTGGCGATTTGATAGCAAATGCGGCAGGCGGTGGTGCACCAGTTGCTGTTGCAGCTGCCCCAGTTGCTGCTGCTGCTGGTGGTGCTGCTGCCGCAGCTCCAGCTGCTGAGGAGAAAAAGAAGGAAGAACCGGAAGAAGAGAGTGATGATGATATGGGATTCGGCTTGTTTGATTAG 339 0.4838 MSLGETACSYAALILHEDGISVTADKISTLLKTAKVPVDSYWPTLFAKLAEKKNLGDLIANAAGGGAPVAVAAAPVAAAAGGAAAAAPAAEEKKKEEPEEESDDDMGFGLFD* 113
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g2223 112 Gene3D - 1 62 IPR038716 -
Gso3g2223 112 MobiDBLite consensus disorder prediction 86 112 - -
Gso3g2223 112 CDD Ribosomal_P1 5 111 - -
Gso3g2223 112 Hamap 50S ribosomal protein L12 [rpl12]. 6 112 IPR027534 GO:0003735|GO:0005840|GO:0006414
Gso3g2223 112 MobiDBLite consensus disorder prediction 97 112 - -
Gso3g2223 112 PANTHER 60S ACIDIC RIBOSOMAL PROTEIN 1 105 - -
Gso3g2223 112 Pfam 60s Acidic ribosomal protein 22 111 - -
Gso3g2223 112 PANTHER 60S ACIDIC RIBOSOMAL PROTEIN P1 1 105 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g2223 Gso-Chr3 47396081 47397508 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso3g2223 1 112 Cytoplasmic Ribosomal Protein Gene Family AT5G24510 57.895 7.17e-39 124