Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g2218 ATGAGCAGCATGAAGGTAGCGAAAGGGCGTATCCTGGTTGGTAAATACGAGTTGGGAAAAACAATTGGAGAGGGAAGCTTTGCCAAGGTGAAGTTCGCCAGGAACGTCCAGAACGGTAACTATGTCGCCATCAAAATCCTCGACCGTAAACATGTCCTCCGCCTCAACATGATGGAACAGCTCATGAAAGAAATATCAACCATGAAGTTAATCAATCACCCCAACGTTGTTAGAATACTTGAGGTGTTGGCAAGCAAAACAAAGATTTACATTGTTCTGGAGTTTGTTGATGGGGGAGAACTATTTGACAAAATTGCTGCAAATGGAAGACTTAAAGAAGATGAAGCAAGAAATTATTTCCAACAGCTTATTAATGCTGTTGATTACTGCCATAGTAGAGGCGTGTATCACAGAGATTTGAAGCCTGAGAATCTTCTAGACTCAAATGGTGTCCTTAAAGTTTCAGATTTTGGTTTGAGTACATACTCACAGAAAGAGGATGAACTGCTCCACACTGCATGTGGAACCCCAAATTATGTTGCACCTGAGGTGCTTAATGATAGAGGTTATGTTGGTTCTACATCTGATATTTGGTCTTGTGGAGTCATTCTCTTTGTACTTATGGCTGGGTACTTGCCTTTTGATGAACCAACTCATATGGCTCTGTACAAAAAAATTGGCAGGGCAGAATTCTCTTGTCCATCATGGTTTTCGCCACAGGCAAAGAAATTGCTAAAACACATTCTTGACCCAAACCCTCTAACGAGGATAAAAATTCCTGAGCTCTTAGAAGATGAATGGTTCAAAAAAGGATACAAGCCAACATCCTTCACTGAGGAAGAGGATCTAAATGTAGATGATGTAGTCGTTGCTTTCAATGAGTCTAATGAAAATCTAGTGACAGAGAGAAAAGAGAAACCCGTCTCCATGAATGCTTTTGAGCTCATTTGTAGGTCACAAAGTTTCAATCTTGACAGTTTGTTTGAGAAGCAAACGGGTCAAGTAAAGCAAGAAACAAGTTTTACTTCACAGTGCCCTGCAAATGAAATTATGTTTAAAATCGAGGAAGCAGCCAAGCCACTGGGCTTTAATGTACACAAGCGAAATTATAAGATGAAGTTGCAAGGTGACAAGAGTGGGAGGAAGGGTCACCTTTCAGTGGCTACTGAGGTTTTTGAAGTGGCGCCATCCGTGCATATGGTGGAGCTGCGAAAGACAGGGGGTGATACATTAGAGTTTCATAAGTTCTACAAAATATTCTCATCAGGGTTGCAAGACATAGTGTGGCATGATACTGAAGGAAAAAAAAATATGAAGAATTAA 1323 0.4067 MSSMKVAKGRILVGKYELGKTIGEGSFAKVKFARNVQNGNYVAIKILDRKHVLRLNMMEQLMKEISTMKLINHPNVVRILEVLASKTKIYIVLEFVDGGELFDKIAANGRLKEDEARNYFQQLINAVDYCHSRGVYHRDLKPENLLDSNGVLKVSDFGLSTYSQKEDELLHTACGTPNYVAPEVLNDRGYVGSTSDIWSCGVILFVLMAGYLPFDEPTHMALYKKIGRAEFSCPSWFSPQAKKLLKHILDPNPLTRIKIPELLEDEWFKKGYKPTSFTEEEDLNVDDVVVAFNESNENLVTERKEKPVSMNAFELICRSQSFNLDSLFEKQTGQVKQETSFTSQCPANEIMFKIEEAAKPLGFNVHKRNYKMKLQGDKSGRKGHLSVATEVFEVAPSVHMVELRKTGGDTLEFHKFYKIFSSGLQDIVWHDTEGKKNMKN* 441
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g2218 440 Gene3D Transferase(Phosphotransferase) domain 1 96 295 - -
Gso3g2218 440 Gene3D Kinase associated domain 1, KA1 304 430 - -
Gso3g2218 440 Pfam Protein kinase domain 16 268 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso3g2218 440 Pfam NAF domain 307 367 IPR004041 GO:0007165
Gso3g2218 440 ProSitePatterns Protein kinases ATP-binding region signature. 22 45 IPR017441 GO:0005524
Gso3g2218 440 ProSiteProfiles NAF domain profile. 305 329 IPR018451 GO:0007165
Gso3g2218 440 Gene3D Phosphorylase Kinase; domain 1 5 95 - -
Gso3g2218 440 CDD CIPK_C 311 418 - -
Gso3g2218 440 PANTHER CBL-INTERACTING SERINE/THREONINE-PROTEIN KINASE 3 10 431 - -
Gso3g2218 440 SUPERFAMILY Protein kinase-like (PK-like) 12 288 IPR011009 -
Gso3g2218 440 ProSiteProfiles Protein kinase domain profile. 16 268 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso3g2218 440 PANTHER - 10 431 - -
Gso3g2218 440 SMART serkin_6 16 268 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g2218 Gso-Chr3 47342421 47349527 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso3g2218 10 430 CBL-interacting serine-threonine protein kinases AT1G01140 73.660 0.0 652
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Gso3g2218 Pkinase 2.5e-70 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso3g2218 - - gmx:100777218 880.937