Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g2215 ATGGCTTCAAATCCCAAACCTTTGACTTTTGAGGAGGTGGCTAATCACAACAACAAAAAGGATTGCTGGATTATTATCAATGGAAAGGTGTATGATATCACGCCATTTCTGGATGAGCATCCTGGAGGAGATGAAGTTTTGGTAACGTCAACAGGGAAGGATGCCACCATTGATTTTGAAGATGTGGGCCACAGTGATTCTGCCATAGAAATGATGGAAAAATACTTCGTCGGGAAGGTTGACACTTCCACTCTTCCAGCGAAAGTTAACCATAGTCTGCCACAACCTACACAAGCAGGTGGCGCTGGCAATCAATCTTCTGGATTTGTTGTAAAGATCTTGCAATTCCTGTTGCCATTCTTGATATTGGGCCTTGCCTTTGCCCTGCAGTACTATGGCAAAAAGAAGCATGCTAGCACCTCATGA 426 0.439 MASNPKPLTFEEVANHNNKKDCWIIINGKVYDITPFLDEHPGGDEVLVTSTGKDATIDFEDVGHSDSAIEMMEKYFVGKVDTSTLPAKVNHSLPQPTQAGGAGNQSSGFVVKILQFLLPFLILGLAFALQYYGKKKHASTS* 142
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g2215 141 Gene3D - 1 86 IPR036400 -
Gso3g2215 141 PANTHER CYTOCHROME B5 ISOFORM C 1 136 - -
Gso3g2215 141 ProSiteProfiles Cytochrome b5 family, heme-binding domain profile. 5 81 IPR001199 -
Gso3g2215 141 ProSitePatterns Cytochrome b5 family, heme-binding domain signature. 36 43 IPR018506 GO:0020037
Gso3g2215 141 SUPERFAMILY Cytochrome b5-like heme/steroid binding domain 4 87 IPR036400 -
Gso3g2215 141 SMART Cyt_b5_2 8 81 IPR001199 -
Gso3g2215 141 PRINTS Cytochrome B5 signature 30 40 IPR001199 -
Gso3g2215 141 PRINTS Cytochrome B5 signature 40 54 IPR001199 -
Gso3g2215 141 PRINTS Cytochrome B5 signature 55 62 IPR001199 -
Gso3g2215 141 PRINTS Cytochrome B5 signature 68 80 IPR001199 -
Gso3g2215 141 PANTHER CYTOCHROME B5 1 136 - -
Gso3g2215 141 Pfam Cytochrome b5-like Heme/Steroid binding domain 9 80 IPR001199 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g2215 Gso-Chr3 47295859 47299648 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso3g2215 1 135 NADPH P450 reductases AT5G53560 59.259 1.12e-59 179
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso3g2215 K23490 - gmx:100788796 278.87
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g2176 19 50208187 50213066 Gso3g2215 3 47295859 47299648 GST
Gso3g2215 3 47295859 47299648 Gso7g0466 7 4620770 4625933 PCT
Gso3g2215 3 47295859 47299648 Gso16g0172 16 1983285 1988206 PCT
Gso7g0466 7 4620770 4625933 Gso3g2215 3 47295859 47299648 PCT
Gso16g0172 16 1983285 1988206 Gso3g2215 3 47295859 47299648 PCT