Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g2160 ATGAATTGTTTTCCGTGTTTTTCAAAGACTAAGAGAACCAACAGCAAGAGGGAGCAACAAGGCGTTATACCACAAGAAAACGTTGTCACAAGGACACCACCAGATGTAAAGAAACAAAAGGCAGATGATCCAAACCAAGTTGACACCTCAAATATTCAAGCACAAAATTTCACATTCCGTGAGCTTGCAATTGCAACAAAGAATTTCCGCCAAGAATGTTTGTTGGGAGAAGGGGGCTTCGGCAGAGTTTATAAGGGAACAATTCCTGCAACCGGGCAGGTGGTAGCAGTGAAGCAACTCGACCGAAATGGGGTCCAAGGTAGCAAGGAATTTCTGGTTGAAGTTTTGATGTTAAGTCTCTTGAACCATGAAAATCTGGTCAAACTCACTGGTTATTGTGCTGATGGAGATCAACGTCTTTTGGTCTATGAGTTCATGCCAGGGGGCTGTTTAGAAGACCGTCTTCTTGAGAGGAAAACAGATGAACCTGCATTAGATTGGTACAACAGAATGAAAATAGCATCAAATGCGGCGAAAGGACTATGGTACTTGCACGACATGGCCAACCCTTCAGTTATATACCGGGACTTGAAATCCGCCAACATCCTGCTGGATAATGATCACAATGCAAAACTATCTGATTATGGACTGGCCAAACTTGCTGGTAAAGATAAGACGAACATTGTACCAACAAGAGTTATGGGCACCTATGGTTACAGTGCTCCCGAGTACGTAAGAACGGGTAACCTCACCTTGAAATCAGATGTGTACAGTTTTGGAGTTGTCTTGCTAGAGCTCATAACTGGACGCCGTGCCATTGACACCACAAGATCGCACGATGAACAAAATCTAGTTTCATGGGCACAACCCATATTCAGGGACCCAAAAAGATATCCAGACATGGCAGATCCAAGTCTGAAAAAAAATTTCCCAGAAAAGGATCTGAACCAAGTTGTTGCAATTGCAGCCATGTGCTTACAGGAGGAAGCAGCAGCGCGTCCTTTGATGAGTGATGTTGTAACTGCTCTCAGTTTTCTTTCCACCTCTCCTCCAGAGGTTGTTCCTGAAGCCCAGAGTGCTGCTCCTGAAAATGAAGCTGGATCTGGTAAGGACAGCGATAGCTCCTCCTCCAATGAAGAAGAGGAGAATGTAACTGCTCAAACTCAGGTTAGTGCAAAATACCAAGAGAGCGAAGACGCCTCAGAGAATGAGTATGATTATTATGGGAATGAAAACCAACAAAAGTACAGTCCACAAGACATCAAACAGACCAAGGAGTTCTACTCCAAATCAAGCCGCAAGAGCAGCACCAGATCAAAGAACGGAACCACTTCTTCTAGCTACAGAAGCAGCTCCACTTCAGATTCAGAGAATGGAAGCAACAAAACCAGTAGGAAAAGCAGCAGAAAGAACGGCAGCAAGAAGTCTTCCTTAAGCCAGAAGAGCGGTAAGAAATCTTCATTGAGCCAAAAGAGCAGCAGCAAGAAATCTTCTGTGAGAGTCTTAAGCCACAAGAAAAGCAAGGATGGAAGCCATTCCCCTAATTCAAGACGCAGTAGCAGCAGTGGCGGTGATCTTTTGGATCGTAGTGGAAGCAGGCCATCAGAAGGGAATGTTTCAATTGGCCTAATCAGCAGTGAGAACTCAGACAGTGACAGCAGCATACGATCAGAGGAAAGGAGCAGCATGCATTTAAATCATACCAGCAGCAGATCGGAGGAGGGAATTGTTTATTACCGATAG 1743 0.4464 MNCFPCFSKTKRTNSKREQQGVIPQENVVTRTPPDVKKQKADDPNQVDTSNIQAQNFTFRELAIATKNFRQECLLGEGGFGRVYKGTIPATGQVVAVKQLDRNGVQGSKEFLVEVLMLSLLNHENLVKLTGYCADGDQRLLVYEFMPGGCLEDRLLERKTDEPALDWYNRMKIASNAAKGLWYLHDMANPSVIYRDLKSANILLDNDHNAKLSDYGLAKLAGKDKTNIVPTRVMGTYGYSAPEYVRTGNLTLKSDVYSFGVVLLELITGRRAIDTTRSHDEQNLVSWAQPIFRDPKRYPDMADPSLKKNFPEKDLNQVVAIAAMCLQEEAAARPLMSDVVTALSFLSTSPPEVVPEAQSAAPENEAGSGKDSDSSSSNEEEENVTAQTQVSAKYQESEDASENEYDYYGNENQQKYSPQDIKQTKEFYSKSSRKSSTRSKNGTTSSSYRSSSTSDSENGSNKTSRKSSRKNGSKKSSLSQKSGKKSSLSQKSSSKKSSVRVLSHKKSKDGSHSPNSRRSSSSGGDLLDRSGSRPSEGNVSIGLISSENSDSDSSIRSEERSSMHLNHTSSRSEEGIVYYR* 581
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g2160 580 SUPERFAMILY Protein kinase-like (PK-like) 55 360 IPR011009 -
Gso3g2160 580 ProSiteProfiles Protein kinase domain profile. 69 346 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso3g2160 580 ProSitePatterns Serine/Threonine protein kinases active-site signature. 192 204 IPR008271 GO:0004672|GO:0006468
Gso3g2160 580 CDD STKc_IRAK 75 343 - -
Gso3g2160 580 MobiDBLite consensus disorder prediction 351 580 - -
Gso3g2160 580 ProSitePatterns Protein kinases ATP-binding region signature. 75 98 IPR017441 GO:0005524
Gso3g2160 580 Gene3D Transferase(Phosphotransferase) domain 1 146 348 - -
Gso3g2160 580 SMART serkin_6 69 346 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso3g2160 580 MobiDBLite consensus disorder prediction 368 396 - -
Gso3g2160 580 MobiDBLite consensus disorder prediction 552 567 - -
Gso3g2160 580 PANTHER OS07G0668900 PROTEIN 1 565 - -
Gso3g2160 580 Gene3D Phosphorylase Kinase; domain 1 31 145 - -
Gso3g2160 580 PANTHER RECEPTOR KINASE-LIKE PROTEIN 1 565 - -
Gso3g2160 580 Pfam Protein kinase domain 71 340 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso3g2160 580 MobiDBLite consensus disorder prediction 406 425 - -
Gso3g2160 580 MobiDBLite consensus disorder prediction 514 551 - -
Gso3g2160 580 MobiDBLite consensus disorder prediction 473 497 - -
Gso3g2160 580 MobiDBLite consensus disorder prediction 434 461 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g2160 Gso-Chr3 46853061 46856411 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso3g2160 1 384 Glycoside Hydrolase AT3G07070 61.929 1.48e-166 478
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Gso3g2160 Pkinase 1.7e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso3g2160 - - gmx:100807682 986.097
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g2114 19 49692473 49695716 Gso3g2160 3 46853061 46856411 GST