Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g2152 ATGACGCTATCATTCGCAAAATCCACAAGATCATGCTCGAGCGCTTATTTAACAGAGGCAAAAACGGTTAAAGATGGCAAGGAAGCAGTGGATCTGTGTCGTTCTGGGGAAAATTTTGACATAATTTTCATGGACAAAGAAATGCCTATCATGGATGGTCACGAGGCGACAAAACATCTAAGTGCTATGGGTGTGAAGAGCATCATTGTGGGAATCACTACCCGTGCTGATGGAAAAGATAAAGAGGAATTTCTAGCTTCTGGATCGAACCACTGCTTTGAGAAGCCTCTTGACCAAGCAAAGGTTGAACAAGTCTTGCAAGAGCATGAGAATTTTGGCATTTGA 345 0.4261 MTLSFAKSTRSCSSAYLTEAKTVKDGKEAVDLCRSGENFDIIFMDKEMPIMDGHEATKHLSAMGVKSIIVGITTRADGKDKEEFLASGSNHCFEKPLDQAKVEQVLQEHENFGI* 115
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g2152 114 PANTHER TWO-COMPONENT RESPONSE REGULATOR 18 111 - -
Gso3g2152 114 CDD REC_hyHK_CKI1_RcsC-like 19 106 - -
Gso3g2152 114 Gene3D - 7 112 - -
Gso3g2152 114 SMART REC_2 1 106 IPR001789 GO:0000160
Gso3g2152 114 Pfam Response regulator receiver domain 17 106 IPR001789 GO:0000160
Gso3g2152 114 ProSiteProfiles Response regulatory domain profile. 1 110 IPR001789 GO:0000160
Gso3g2152 114 PANTHER TWO-COMPONENT RESPONSE REGULATOR 24 18 111 - -
Gso3g2152 114 SUPERFAMILY CheY-like 20 109 IPR011006 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g2152 Gso-Chr3 46789293 46789785 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso3g2152 20 102 Response Regulator Gene Family AT3G04280 51.765 1.04e-22 84.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Gso3g2152 Response_reg 1.7e-14 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso3g2152 - - gmx:113001224 230.335
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g2107 19 49629626 49630205 Gso3g2152 3 46789293 46789785 GST