Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g2138 ATGTATAGAGAAGCAGCGGTGAAGAAAGAGGAATACCAAGTGTTGGAAGAACTCGGGCGAGGCCGTTTCGGCACCGTGTTCCGCTGCTTCCACCGCACTTCAAACAAATTCTACGCGGCTAAACTCATCGAGAAGCGCAGACTCCTAAACGAGGACAGGCGCTGCATCGAAATGGAGGCCAAGGCCATGAGCTTCCTCTCTCCACACCCAAACATCCTCCAAATCATGGACGCCTTCGAGGACGCCGACTCCTGCTCCATAGTCCTGGAGCTCTGCCAGCCACACACCCTCTTGGACCGCATCGCCGCCCAAGGCCCCTTGACGGAGCCCCACGCCGCCAGCCTCCTCAAACAGCTTCTGGAGGCCGTGGCGCACTGCCACGCCCAGGGACTCGCGCACAGGGACATCAAGCCGGAAAACATCCTGTTCGATGAAGGGAACAAGCTTAAGCTCTCAGACTTCGGGTCCGCCGAGTGGTTGGGTGAGGGGAGTAGCATGAGCGGTGTGGTGGGGACGCCCTATTACGTTGCACCCGAAGTGATTATGGGGAGAGAGTACGATGAGAAGGTTGATGTGTGGAGCAGCGGGGTCATTCTTTACGCCATGTTGGCTGGCTTTCCACCCTTTTATGGAGAGTCTGCTCCCGAAATCTTTGAGTCTGTTTTGAGGGCTAATCTTAGGTTTCCCAGCCTAATCTTTAGCTCTGTTTCTGCACCTGCTAAGGACCTCCTTAGGAAAATGATTTCCAGGGATCCCTCTAACCGCATTTCCGCACATCAAGCCTTGCGACACCCGTGGATTTTGACTGGGGCTCTCACCACTGCAACTATATCCAATTTTCTCACTTAA 849 0.5477 MYREAAVKKEEYQVLEELGRGRFGTVFRCFHRTSNKFYAAKLIEKRRLLNEDRRCIEMEAKAMSFLSPHPNILQIMDAFEDADSCSIVLELCQPHTLLDRIAAQGPLTEPHAASLLKQLLEAVAHCHAQGLAHRDIKPENILFDEGNKLKLSDFGSAEWLGEGSSMSGVVGTPYYVAPEVIMGREYDEKVDVWSSGVILYAMLAGFPPFYGESAPEIFESVLRANLRFPSLIFSSVSAPAKDLLRKMISRDPSNRISAHQALRHPWILTGALTTATISNFLT* 283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g2138 282 ProSiteProfiles Protein kinase domain profile. 12 267 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso3g2138 282 PANTHER PHOSPHOENOLPYRUVATE CARBOXYLASE KINASE 2 6 274 - -
Gso3g2138 282 SUPERFAMILY Protein kinase-like (PK-like) 10 270 IPR011009 -
Gso3g2138 282 Pfam Protein kinase domain 12 267 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso3g2138 282 CDD STKc_CAMK 12 266 - -
Gso3g2138 282 PANTHER SERINE/THREONINE-PROTEIN KINASE 6 274 - -
Gso3g2138 282 Gene3D Transferase(Phosphotransferase) domain 1 3 279 - -
Gso3g2138 282 ProSitePatterns Serine/Threonine protein kinases active-site signature. 131 143 IPR008271 GO:0004672|GO:0006468
Gso3g2138 282 ProSitePatterns Protein kinases ATP-binding region signature. 18 41 IPR017441 GO:0005524
Gso3g2138 282 SMART serkin_6 12 267 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g2138 Gso-Chr3 46654718 46655882 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso3g2138 9 266 EF-hand Containing Proteins AT2G38910 45.038 2.93e-74 236
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Gso3g2138 Pkinase 7.3e-75 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso3g2138 - K08794 gmx:547573 566.229