Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g2119 ATGCAGGGGACTCCAGTGAACATTATTGCGGGTTCTCATGTCTGGGTTCAAGATCCACAAGTATGTTGGATTGATGGACAGGTATCCAAAATCATCAAAGGAAATGATGCTGAAATTGAAGCAACCAATGGAAATAAGGTTGTCGCAAAGTTATCAAATATATATCCCAAAGATACAGAAGCTCCTCCGGGTGGAGTGGATGACATGACTAAGCTTTCCTATTTGCATGAGCCTGGAGTCCTCCAGAACTTAAAAACTAGATATGAACTGAATGAAATATACACTTATACGGGAAATATTCTGATTGCAATAAATCCATTTCAAAGACTACCTCATATTTATGATTTGCACATGATGCAACAATACAAGGGAGCACCATTTGGAGAGTTGAGTCCTCATGTATTTGCAGTTGCTGATGTTGCATATAGGGCAATGATTAATCACGACGGGAAAAGCAATTCAATTCTGGTCAGTGGGGAAAGTGGAGCTGGTAAAACCGAAACTACAAAAATGCTTATGCGCTACCTTGCTTTCTTAGGAGGTAGGGCTGTCACTGAAGGACGAACCGTTGAACAACAAGTTCTTGAATCAAATCCTGTTCTGGAAGCATTTGGCAATGCTAAAACTGTCAGGAATAACAATTCTAGTCGTTTTGGTAAATTTGTTGAGATCCAATTTGATAAGAGTGGAAGAATCTCAGGAGCAGCCATTCGAACATACCTTCTAGAGAGATCTCGGGTTTGCCAGATTAATGATCCTGAACGAAACTACCACTGCTTTTATCTTCTTTGTGCTGCACCACAGGAGGAAATTGAGAAATACAAATTAGGAAATCCCAAAACGTTTCATTACCTTAACCAGTCAAAATGCTATGAACTGGATGATATAAATGATTCCCGTGAGTATCTTGCTACCAGGAGAGCTATGGATATTGTCGGAATAAGCCAAAATGAGCAGGAAGCAATTTTCAGAGTTGTTGCTGCAATTCTTCATATAGGGAATATTGATTTTGCCAAAGGAAGGGAAGTTGATTCATCAGTTCCAAAAGATGACAAAGCCAAATTCCACTTAAAAACAACTTCTGAGCTTCTTATGTGCGATGTTCGTGCCTTGGAAGATGCATTATGTAAGCGTGTCATGATAACCCCTGAGGAAGTTATAAAACGGAGCCTTGATCCCCAAAGTGCAGCAATCAGCAGAGATGGCTTAGCAAAAACAATTTATTGTAGGCTCTTTGACTGGTTGGTGAACAAGATTAATAGTTCAATCGGACAAGACTCCAATTCTAAATCTTTGATTGGGGTGCTTGATATCTATGGTTTTGAAAGCTTTAAATCTAACAGTTTTGAGCAGTTCTGCATTAATTTTACAAATGAGAAGTTGCAGCAACATTTCAATCAGCACGTGTTTAAGATGGAACAAGAAGAATACAAGAAGGAGCAAATCGATTGGAGCTACATTGAATTTGTTGACAACCAAGATGTTTTGGACCTTATTGAAAAGAAACCTGGAGGAATAATTGCACTCCTTGACGAAGCTTGCATGTTTCCAAAGTCTACACACGAAACATTTTCAAACAAGCTTTATCAAACATTTAAGAATAATAAGCGCTTTATTAAGCCAAAATTGTCTCGAACAGATTTCACTATTTCTCATTATGCTGGCGAGGTGCAGTACCGGTCTGACCAATTTTTAGACAAAAACAAGGATTATGTGGTTCCTGAACATCAAGATTTATTGGGTGCTTCCAAATGTCCTTTTGTAGCTGGCCTTTTTCCTCCACTTCCAGAAGAGACATCGAAGTCTTCCAAGTTTTCTTCAATTGGTTCTAGATTTAAGCTGCAACTACAGCAATTAATGGAAATACTAAGCTCTACAGAGCCTCATTACATTAGATGTGTGAAACCAAACAACCTCCTCAAGCCAGCAATTTTTGAGAATGCCAATATTATACAACAACTTCGCTGTGGTGGTGTTTTGGAAGCAATCAGAATCAGTTGTGCTGGCTACCCTACTCGCCGTGCTTTCTTTGAATTTGTAAACCGATTTTCCCTTCTTGCTCCAGATGTCACAGAAGCACACCATGATGAGAAGATTGTTTGCCAAAAGATACTGGAAAAAGCGGGGCTTAAAGGATATCAGATTGGAAAAACAAAGGTATTCCTAAGAGCAGGTCAGATGGCTGAACTAGATGCACAGAGAGCTAAAAAACTCAGTAATGCAGCAAAAACTATCCAACGGCGTATACGAACCCATCAAGCTCGCAAACATTATCTTGAACTACGAAACAAGACTATATATATGCAGTCTGTGTGCAGAGGAAGACTTGCATTCAAACTTTATCAACACAAGAGAAGGGAGGCGGCTGCTGTGAAAATTCAGAAGAACATACGCAGATATGAAGCTAGGAATACCTATATTAAACTCCAAGCATCAGTACTTACTTTGCAAACAGCTTTAAGGGCAATTGCTTCCCTCAAAGAGTTCAGATTTAGGAAACAGACTAAAGCTTCCATCATTATTCAGGCTCGGTGGCGGTGCCACAAAGCTGCTTCATATTATAAGAAGCTCAAGAAAGGTTCAATTGTCACACAATGCCGATGGAGGGGGCGCATGGGCAGAAAAGAACTTAGGAAAATGAAAATGGCTGCAAGAGAAACTGGCGCGCTTAAAGACGCAAAGGACAAGCTTGAAAAAAGAGTGGAGGATATCACTTGGCGTCTTCAACTAGAGAAAAGTTTAAGGACCAACCTAGAAGAATCCAAATCACAAGAGATAGCAAAACTGAAGAATGCACTGCAGGAGATGCAGAACAAAGTTGATGAATCCAATGCATTGCTTATAAAGGAGAGAGAGAATGCAAAGAAGGCCATTGAAGAAGCACCTCCTGTTGTTAAAGAAATTCAGGTTATTGTTGAAGACACTCAGAAGATTGAATCACTAACATTGGAAGTTGAGAGTCTAAAGACATCCCTTGAGTCGGAGAAACAGAAAGCTGACGAGAAATATAATGAAGCCCAAGCTTGTAGTGAAGAAAGGGGGAAAAAATTAGAAGACACAGAGAAGAAGGTTCGTCAACTCCAAGAATCCTTAGCCAGGCTAGAAGAGAAAATTACTAACTTAGAATCAGAGAATCAAGTTCTGCGTCAACAAGCCCTGTCCATGGCACCTAATAAGTTCCTCTCAGGACGCTCTAGATCAATCATTCGGAGAACGGACAGTGGACATCTTGGAGTTGAAGCAAAGACAACTTTGGATATGCATAGCACATCAATGAACCACAGGGAATCTTCGGAAGTGGAGGATAAACCACAGAAGTCACTAAATGAGAAACAACTAGAGAACCAAGACTTACTCATTAAATTCATTCCTAAACAGATAGGTTTTGCTGGGAATAGACCAATTGCTGCTTGTATCATATACAAATGCCTCTTGCATTGGAGATCATTTGAAGTTGACCGTACTAGCGTTTTTGATCGTATAATTCAAACTATTGGGCATTCAATTGAGACCCAGGATAACAATGATGTTTTGGCTTATTGGTTATCCAACACCTCTACACTTGTCTTGTTACTCCAGCGCACACTTAAGGCAAGTGGTGCTGCTGGAATGGCTCCTCAACGACGTCGTTCTTCGTCAGGGACAGTGTTTGGGAGGATGACTCATAGTTTCCGTGGAACTCCAGCAGGAGTCAATCTTTCCCTAATCAATGGTAGCATGAGCGGAGGCATAGATGCGTCGAGACAAGTTGAAGCCAAGTACCCTGCTCTTCTTTTCAAACAGCAGCTCACAGCTTATGTGGAAAAGATATACGGAATGATTCGAGATAACTTGAAGAAAGAAATTTCTCCCTTGCTTGGGTTATGCATCCAGGCGCCTAGAACATCCAGAGCGAGCTTTGTTAAGGGATCATCACGTTCAGCTGCAACCACTGAAGCCCAGAAAGCTTTGATTGGTCACTGGCAGGAGATAGTTAAGAGCCTTGGGAACTTTTTAAATACTTTGAAAGCAAATCATGTTCCCCCATTTTTGGTTCGTAAGGTGTTCACTCAAATTTTTTCCTTCATCAATGTCCAACTTTTCAATAGTCTTCTTCTAAGACGGGAGTGCTGCTCATTTAGCAATGGAGAATATGTGAAATCTGGTTTGGCTGAATTGGAGAATTGGTGTAATAATGCCACTGATGAGTACGCCGGTTCAGCTTGGGATGAGCTCAAACATATAAGACAGGCTATTGGATTTTTGGTCATACATCAGAAACCAAGGAAAACGCTGAATGAAATAACTCATGAACTGTGTCCAGTCCTGAGTATACAGCAGCTATATCGGATAAGCACCATGTACTGGGATGACAAGTATGGCACACATAGCGTATCCCCTGATGTCATATCCAATATGAGAGTGTTGATGACTGAAGATTCAAATAATGCAGTTAGTAATTCTTTCCTGTTGGATGATGATTCAAGCATTCCGTTTTCAGTTGATGACATATCGAAGTCGAAGGAACCCATAGATATCTCTGATATAGAGCCCCCACCAGTAATACGTGATAACACTGGCTTTAGTTTCTTGCTGCCACACCCAGACTGA 4590 0.4057 MQGTPVNIIAGSHVWVQDPQVCWIDGQVSKIIKGNDAEIEATNGNKVVAKLSNIYPKDTEAPPGGVDDMTKLSYLHEPGVLQNLKTRYELNEIYTYTGNILIAINPFQRLPHIYDLHMMQQYKGAPFGELSPHVFAVADVAYRAMINHDGKSNSILVSGESGAGKTETTKMLMRYLAFLGGRAVTEGRTVEQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVEIQFDKSGRISGAAIRTYLLERSRVCQINDPERNYHCFYLLCAAPQEEIEKYKLGNPKTFHYLNQSKCYELDDINDSREYLATRRAMDIVGISQNEQEAIFRVVAAILHIGNIDFAKGREVDSSVPKDDKAKFHLKTTSELLMCDVRALEDALCKRVMITPEEVIKRSLDPQSAAISRDGLAKTIYCRLFDWLVNKINSSIGQDSNSKSLIGVLDIYGFESFKSNSFEQFCINFTNEKLQQHFNQHVFKMEQEEYKKEQIDWSYIEFVDNQDVLDLIEKKPGGIIALLDEACMFPKSTHETFSNKLYQTFKNNKRFIKPKLSRTDFTISHYAGEVQYRSDQFLDKNKDYVVPEHQDLLGASKCPFVAGLFPPLPEETSKSSKFSSIGSRFKLQLQQLMEILSSTEPHYIRCVKPNNLLKPAIFENANIIQQLRCGGVLEAIRISCAGYPTRRAFFEFVNRFSLLAPDVTEAHHDEKIVCQKILEKAGLKGYQIGKTKVFLRAGQMAELDAQRAKKLSNAAKTIQRRIRTHQARKHYLELRNKTIYMQSVCRGRLAFKLYQHKRREAAAVKIQKNIRRYEARNTYIKLQASVLTLQTALRAIASLKEFRFRKQTKASIIIQARWRCHKAASYYKKLKKGSIVTQCRWRGRMGRKELRKMKMAARETGALKDAKDKLEKRVEDITWRLQLEKSLRTNLEESKSQEIAKLKNALQEMQNKVDESNALLIKERENAKKAIEEAPPVVKEIQVIVEDTQKIESLTLEVESLKTSLESEKQKADEKYNEAQACSEERGKKLEDTEKKVRQLQESLARLEEKITNLESENQVLRQQALSMAPNKFLSGRSRSIIRRTDSGHLGVEAKTTLDMHSTSMNHRESSEVEDKPQKSLNEKQLENQDLLIKFIPKQIGFAGNRPIAACIIYKCLLHWRSFEVDRTSVFDRIIQTIGHSIETQDNNDVLAYWLSNTSTLVLLLQRTLKASGAAGMAPQRRRSSSGTVFGRMTHSFRGTPAGVNLSLINGSMSGGIDASRQVEAKYPALLFKQQLTAYVEKIYGMIRDNLKKEISPLLGLCIQAPRTSRASFVKGSSRSAATTEAQKALIGHWQEIVKSLGNFLNTLKANHVPPFLVRKVFTQIFSFINVQLFNSLLLRRECCSFSNGEYVKSGLAELENWCNNATDEYAGSAWDELKHIRQAIGFLVIHQKPRKTLNEITHELCPVLSIQQLYRISTMYWDDKYGTHSVSPDVISNMRVLMTEDSNNAVSNSFLLDDDSSIPFSVDDISKSKEPIDISDIEPPPVIRDNTGFSFLLPHPD* 1530
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g2119 1529 CDD MYSc_Myo11 78 723 IPR036018 -
Gso3g2119 1529 Gene3D - 442 626 - -
Gso3g2119 1529 SMART MYSc_2a 58 736 IPR001609 GO:0003774|GO:0005524|GO:0016459
Gso3g2119 1529 PANTHER MYOSIN-9 7 1526 - -
Gso3g2119 1529 SMART iq_5 833 855 IPR000048 GO:0005515
Gso3g2119 1529 SMART iq_5 737 759 IPR000048 GO:0005515
Gso3g2119 1529 SMART iq_5 760 782 IPR000048 GO:0005515
Gso3g2119 1529 SMART iq_5 785 807 IPR000048 GO:0005515
Gso3g2119 1529 SMART iq_5 856 878 IPR000048 GO:0005515
Gso3g2119 1529 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 786 886 IPR027417 -
Gso3g2119 1529 ProSiteProfiles IQ motif profile. 738 765 IPR000048 GO:0005515
Gso3g2119 1529 CDD MyosinXI_CBD 1110 1495 IPR037975 GO:0007015
Gso3g2119 1529 Coils Coil 735 755 - -
Gso3g2119 1529 Gene3D - 788 835 - -
Gso3g2119 1529 Gene3D - 736 787 - -
Gso3g2119 1529 Gene3D - 836 885 - -
Gso3g2119 1529 Pfam IQ calmodulin-binding motif 835 855 IPR000048 GO:0005515
Gso3g2119 1529 Pfam IQ calmodulin-binding motif 740 758 IPR000048 GO:0005515
Gso3g2119 1529 Pfam IQ calmodulin-binding motif 788 806 IPR000048 GO:0005515
Gso3g2119 1529 Pfam DIL domain 1348 1451 IPR002710 -
Gso3g2119 1529 Gene3D - 669 735 - -
Gso3g2119 1529 Gene3D - 255 313 - -
Gso3g2119 1529 ProSiteProfiles IQ motif profile. 786 815 IPR000048 GO:0005515
Gso3g2119 1529 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 40 788 IPR027417 -
Gso3g2119 1529 Coils Coil 915 953 - -
Gso3g2119 1529 ProSiteProfiles IQ motif profile. 834 861 IPR000048 GO:0005515
Gso3g2119 1529 PANTHER MYOSIN 7 1526 - -
Gso3g2119 1529 ProSiteProfiles IQ motif profile. 857 886 IPR000048 GO:0005515
Gso3g2119 1529 Gene3D Kinesin motor domain 67 665 IPR036961 -
Gso3g2119 1529 PRINTS Myosin heavy chain signature 94 113 IPR001609 GO:0003774|GO:0005524|GO:0016459
Gso3g2119 1529 PRINTS Myosin heavy chain signature 152 177 IPR001609 GO:0003774|GO:0005524|GO:0016459
Gso3g2119 1529 PRINTS Myosin heavy chain signature 199 226 IPR001609 GO:0003774|GO:0005524|GO:0016459
Gso3g2119 1529 PRINTS Myosin heavy chain signature 432 460 IPR001609 GO:0003774|GO:0005524|GO:0016459
Gso3g2119 1529 PRINTS Myosin heavy chain signature 485 513 IPR001609 GO:0003774|GO:0005524|GO:0016459
Gso3g2119 1529 ProSiteProfiles Myosin motor domain profile. 64 735 IPR001609 GO:0003774|GO:0005524|GO:0016459
Gso3g2119 1529 Pfam Myosin head (motor domain) 66 723 IPR001609 GO:0003774|GO:0005524|GO:0016459
Gso3g2119 1529 Coils Coil 978 1051 - -
Gso3g2119 1529 ProSiteProfiles Dilute domain profile. 1159 1472 IPR002710 -
Gso3g2119 1529 SMART DIL_2 1347 1454 IPR002710 -
Gso3g2119 1529 Pfam Myosin N-terminal SH3-like domain 10 53 IPR004009 GO:0003774|GO:0005524|GO:0016459
Gso3g2119 1529 ProSiteProfiles IQ motif profile. 761 790 IPR000048 GO:0005515
Gso3g2119 1529 ProSiteProfiles Myosin N-terminal SH3-like domain profile. 9 59 IPR004009 GO:0003774|GO:0005524|GO:0016459
Gso3g2119 1529 Gene3D Myosin VI head, motor domain, U50 subdomain 315 604 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g2119 Gso-Chr3 46476851 46487856 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso3g2119 3 1529 Myosins gene family AT1G54560 80.666 0.0 2607
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso3g2119 K10357 - gmx:100816792 2641.68
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso3g2119 3 46476851 46487856 Gso10g0360 10 3785004 3803227 PCT