Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g2101 ATGAATGAAATTCAAATACTAATTGTTGCTATCACAATTCACAAGAGATTGGATTTTGGAATGGAAAGGGTGTTGTCAGTAGATGAGATATCGGAGCAATACTGGGTGGCTGCATCATCTTCTTCATCATCATCATCATCATCGTTCAAGTCAAAGATGAACCGGAGCGAATCCGAATGGGCCTTTCAGCAGTTCCTACAGCAGGAAGCTGCTTCTTCTTCATCTAATTCTGATCATGATGATGATCATCATCATGCTAAACTCAAAAAGGAATCCAACACCAACATCCCTGTTACTCTACATGTTGATTCCCAAGACTACCATGCTATTCTTAAGACCAAGCTTAATCTCGCATGCGCTGCTGTTGCTATGACTCGGGGATCTTTGGTCAAATCTCAAAACCCTGACAGTGGACCACAGGCATCTAATTTTTCTGAAGTTGGATCGCATGCTACCTTAAAAGGATCTGGCCCTTTTGGAAATGATGATCCCTCTAAATTACAAAATAAAGATATCAAAGCACAAATTGGGATTCCTTCCTCACCTTCCATGCAAAACAAATCCGCTGTCGTCGCAATGAGGCCAACAATAAGTGGATCATCAGGAGAACAATCAGATGATGAGGAAGCGGAAGGAGAGATTAATATGACTGGAAACATGACTCCTGTTGATGCAAAACGAGTAAGGAGGATGCTTTCTAATAGGGAGTCAGCCAGACGCTCAAGAAGAAGAAAGCAGGCTCATTTAACTGAGCTGGAGACACAGGTCTCCCAATTAAGAAGCGAAAATTCTTCATTGTTAAAGCGCTTCACGGATGTGAGCCAGAAATACAGTAATGCTGCAGTTGACAACAGAGTACTGAAAGCTGATGTTGAAACATTAAGAGCAAAGGTGAAGATGGCTGAAGAGACAGTGAAAAGAATTACTGGGTTGAGCCCAATGCTCCATGCCATGACTGAGATGTCATCACTGGGAATGCCATTGTTTGATGAAAGTCCTTCTGAGACATCAGCTGATGCTGCTGTTCCAGTGCAAGAAGACCCAAATCATCACCTTTGTCAACCCACTTCTAATAATGGGTTGGGAGGCATTTCTTCAATTGAAACTGTGCAGCAGAATGTTGCAGCAGTGGTAGGTGGCAACAAAATGGGGAGAACAACTTCCCTGCATAGAGTGGCTAGCCTGGAACATCTTCAGAAGCGGATTCGTGGTGGTGCAGATTCACGTGGAACTCCTTCTAATTGA 1245 0.4313 MNEIQILIVAITIHKRLDFGMERVLSVDEISEQYWVAASSSSSSSSSSFKSKMNRSESEWAFQQFLQQEAASSSSNSDHDDDHHHAKLKKESNTNIPVTLHVDSQDYHAILKTKLNLACAAVAMTRGSLVKSQNPDSGPQASNFSEVGSHATLKGSGPFGNDDPSKLQNKDIKAQIGIPSSPSMQNKSAVVAMRPTISGSSGEQSDDEEAEGEINMTGNMTPVDAKRVRRMLSNRESARRSRRRKQAHLTELETQVSQLRSENSSLLKRFTDVSQKYSNAAVDNRVLKADVETLRAKVKMAEETVKRITGLSPMLHAMTEMSSLGMPLFDESPSETSADAAVPVQEDPNHHLCQPTSNNGLGGISSIETVQQNVAAVVGGNKMGRTTSLHRVASLEHLQKRIRGGADSRGTPSN* 415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g2101 414 Gene3D - 225 280 - -
Gso3g2101 414 SUPERFAMILY Leucine zipper domain 226 277 IPR046347 GO:0003700|GO:0006355
Gso3g2101 414 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 224 276 IPR004827 GO:0003700|GO:0006355
Gso3g2101 414 MobiDBLite consensus disorder prediction 130 167 - -
Gso3g2101 414 MobiDBLite consensus disorder prediction 75 91 - -
Gso3g2101 414 MobiDBLite consensus disorder prediction 71 92 - -
Gso3g2101 414 MobiDBLite consensus disorder prediction 130 150 - -
Gso3g2101 414 SMART brlzneu 222 286 IPR004827 GO:0003700|GO:0006355
Gso3g2101 414 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 229 244 IPR004827 GO:0003700|GO:0006355
Gso3g2101 414 Pfam bZIP transcription factor 225 278 IPR004827 GO:0003700|GO:0006355
Gso3g2101 414 PANTHER BASIC LEUCINE ZIPPER 63 21 398 - -
Gso3g2101 414 Coils Coil 235 269 - -
Gso3g2101 414 Coils Coil 284 304 - -
Gso3g2101 414 Pfam Basic leucine-zipper C terminal 293 406 IPR020983 -
Gso3g2101 414 PANTHER BZIP TRANSCRIPTION FACTOR 21 398 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g2101 Gso-Chr3 46327372 46331492 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso3g2101 21 315 bZIP Transcription Factor Family AT4G02640 37.994 1.58e-44 157
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Gso3g2101 bZIP_C 4.9e-45 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso3g2101 K25784 - gmx:778137 751.895
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g2062 19 49181817 49187069 Gso3g2101 3 46327372 46331492 GST
Gso3g2101 3 46327372 46331492 Gso10g1481 10 41209517 41212727 PCT
Gso10g1481 10 41209517 41212727 Gso3g2101 3 46327372 46331492 PCT