Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g2092 ATGGGGAAGGCCAGCAAATGGATCAGAAACTTCCTACTAGGGAAAAAAGAAGATAAAATAAAGAAGATCGATGCATTCTGCAGCGAGGATAAGAGTGGCAACACAGGGAGTCTGATTGTGAGTCCCAAAGTGAAGCGCAGATGGAGCTTCGGAAAACTAACAGGAGCAGGGCATAAATTTTCCAGATCATTTGACTCAGCTGACTCTGCAAAACTTCAAATACAAGCCTTGTTGGAAACCAAGACTCCAAGGCGTCTTCCAAAACCATTAGCAAAGCCTTCTAAAGATAAAAACAAAGCCGCTACAAAGATTCAGGCTAGCTTTCGCTCTTATTTGGCAAGGAGAGCATTGCATGCTTTAAGGGGATTAGTCAAGTTACAGGCACTAGTGAGGGGTCACCTTGTAAGGAAACAAACAACTGCTACACTGCGTGGAATGCATGCGTTGATGGCCATACAAGTTAGAGCCCGAATTCACAGAGTTCAGATGGCAGAGGAAGCAAACCTCCTCCGACAACAATCGCCTCCGCAACATAGACAAGTTCCATACTCCACTGATCTCATAACAGAAGAAAATAAAGATTCAAACCATATGAGTGTGGAAGAAATGTTGGAGGTTTTGAAAAGCAGAAGTGGCCCACTAGATGGTTCATATGTTAAGGGCAGAGAGCGTGATTCCATGACATACTATTCCAAGCATGTGCCGGTTGTTTCTAAACGAGAAAACCAATACAAGAAAACTCTAATCATAGAACCAAACAGCCTAGAAAACTACCGATCCATGTCTGAATTTAACCCAACGACAATTGCCTTGTCAACTTCTCAGCGCCATTCAGTGCCTCACGGCCAATCACTGTCACCAAATTACATGAACAAGACAGAATCTTCAAGGGCTAAAGCAAGGTCGCAGAGTGAACCAAGACAACGACCAATACGGGGAACAAGGCACAAAGGCAAGTCTGTGGAATCACCATTGAATGGTCCAAGACAAAATCTGTTCTCAAACTCGTTACGCTTCGATCATGGAAGCATGGACCATTGGGTTATCAATTTTCATGGGTCAACGAACGACAGCAGGCGCAATTCCTTTGGCAGCAGCTCGGTTACTACTGATTCCTATTATTGA 1125 0.44 MGKASKWIRNFLLGKKEDKIKKIDAFCSEDKSGNTGSLIVSPKVKRRWSFGKLTGAGHKFSRSFDSADSAKLQIQALLETKTPRRLPKPLAKPSKDKNKAATKIQASFRSYLARRALHALRGLVKLQALVRGHLVRKQTTATLRGMHALMAIQVRARIHRVQMAEEANLLRQQSPPQHRQVPYSTDLITEENKDSNHMSVEEMLEVLKSRSGPLDGSYVKGRERDSMTYYSKHVPVVSKRENQYKKTLIIEPNSLENYRSMSEFNPTTIALSTSQRHSVPHGQSLSPNYMNKTESSRAKARSQSEPRQRPIRGTRHKGKSVESPLNGPRQNLFSNSLRFDHGSMDHWVINFHGSTNDSRRNSFGSSSVTTDSYY* 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g2092 374 MobiDBLite consensus disorder prediction 352 374 - -
Gso3g2092 374 SMART iq_5 96 118 IPR000048 GO:0005515
Gso3g2092 374 SMART iq_5 119 140 IPR000048 GO:0005515
Gso3g2092 374 Pfam Protein of unknown function (DUF4005) 274 317 IPR025064 -
Gso3g2092 374 ProSiteProfiles IQ motif profile. 97 125 IPR000048 GO:0005515
Gso3g2092 374 MobiDBLite consensus disorder prediction 298 319 - -
Gso3g2092 374 ProSiteProfiles IQ motif profile. 121 148 IPR000048 GO:0005515
Gso3g2092 374 MobiDBLite consensus disorder prediction 273 332 - -
Gso3g2092 374 PANTHER IQ CALMODULIN-BINDING MOTIF PROTEIN 1 361 - -
Gso3g2092 374 Gene3D - 94 149 - -
Gso3g2092 374 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 95 139 IPR027417 -
Gso3g2092 374 Pfam IQ calmodulin-binding motif 99 117 IPR000048 GO:0005515
Gso3g2092 374 Pfam IQ calmodulin-binding motif 124 138 IPR000048 GO:0005515
Gso3g2092 374 MobiDBLite consensus disorder prediction 273 297 - -
Gso3g2092 374 PANTHER IQ-DOMAIN 5-RELATED 1 361 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g2092 Gso-Chr3 46264725 46266743 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso3g2092 1 163 IQD Protein Family AT4G14750 41.954 5.95e-29 115
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso3g2092 - - gmx:100527816 733.791
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g2052 19 49099202 49101463 Gso3g2092 3 46264725 46266743 GST