Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g2085 ATGAATGAGCTTGAAACAACAGATTCCTCTGCATCTGAGTTTGTTGAAGTTGATCCAACTGGCAGATACGGCAGGTACAATGAAATCCTCGGCAAAGGAGCTTCCAAGACAGTATATAGAGCATTTGATGAGTACCAAGGGATTGAAGTTGCTTGGAATCAGGTTAAATTGTATGATTTTCTGCAGAGCCCTGAAGATCTCGAGAGGCTTTACTGTGAAATTCACCTCCTCAAGACGTTGAAGCACAGAAACATAATGAAATTTTACACATCTTGGGTTGATACAGCAAATAGAAATATCAACTTTGTGACTGAAATGTTCACTTCTGGCACCCTTAGACAGTATAGGCAAAAGCACAAGAGAGTTAACATTAGGGCAGTGAAGCATTGGTGTAGACAGATCCTGAGAGGGCTTCTCTATCTTCATAGCCATGACCCACCTGTGATCCATAGAGATCTTAAATGTGATAATATTTTTATCAATGGAAACCAAGGGGAAGTTAAGATTGGGGATCTTGGGTTGGCAGCAATTCTCCGCAAGTCCCATGCTGCTCATTGTGTAGGGACGCCTGAGTTCATGGCACCAGAAGTTTATGAAGAGTCATATAATGAATTAGTTGACATATATTCCTTTGGGATGTGTGTATTAGAGATGGTCACGTTTGAATATCCTTATAGCGAATGTAGCCATCCAGCACAAATCTACAAGAAAGTTATTTCAGGGAAGAAACCGGATGCCTTGTATAAAGTGAAGGATCCAGAAGTACGACAATTTGTTGAGAAATGCCTGGCAACGGTGTCTCTAAGGCTCTCTGCTAGGGAGCTTCTAGATGATCCTTTTCTTCAGATTGATGATTATGAGTATGATTTGGGACCCGTGGACAGTGGAGCATTTGATGACTTGGGTCCTCTTACCCATCAGCCATTCTTTGATCTCCACCAGAGTTTTAGTAACATGAGTACTGAATACTCAAATGGCTTCGAATATGGAGACTGGTATTCTCATCCAGCTGATATTGAACCTAGTGGAATTGAACTTTTCGAGTGCCATGATGAGGAAGCCTCTGAAGATGTTGACATAAGCATCAGAGGCAAGAGGAAAGATGACGGTGGCATCTTTTTGAGACTAAGAATTGCAGACAAAGAAGGCCATATTCGGAATATTTATTTTCCATTTGACATAGGGACGGACACAGCATTAAGTGTAGCAACTGAAATGGTTGCAGAACTCGACATTACTGATCAGGATGTTACCAGTATTGCAGATATGATAGATGGGGAAATTGCTTCCTTGGTACCTGAATGGAAGCCGGGACCAGGAATTGAAGAAACCAACCATCATTTAAATAATTTTTTTTGTCACAATTGTGTGTCTATTCATACTTCGGGTGGCAATGTTATGGAATTTCTTTCACATAATCAATGTGGAAAGAACTCGCAACTTCCTCAATGCTGTAGGCATGGATGTACTTCAATGCATGGGCGTTTTGAGGAGATTACCTTCCCATCCGAGTGTGACAATCATGTTAGAGGGGATGCACCTATCAAATCAAGCCAATCAGACTGCTTGCAGCGTCAGGAATCATGGAATCATCATGAAAGTTGTGAACTGAGTCCAGTAGAGTCTGATGAAAGTCATTCTGGTGAGCAATTTGATAAACCAGTATTAGCAGAAGACAAAGGAAAAAAAGGCATTTGGGAAAACAAGTTCGCACATGATCCAGGAAATCCCCCACGAAGTTTATCAGGAAATTATTTCTCTGCTATCCGTTTTTTGTGTTGTGGCCCTGAGATTGAATATGAGAAAGAGGTTCGACAAGAAATGAGATGGATCAAAGCAAAACACAATAGGGAGTCAAGGGAACTTGGAGATAAACGGTTTGGTATAGCAACTGAATCTTCACATACTAGTAATAGAGAGCACAAAACTGAACAATGCATTATGCCACCACTGCCACAGACAGCAAACGGTGTGCACAATGGGATTCACTTGAAACCCTTAGGTAATATCTGGAATTATGAATCCAGTTGCCGTTCTCAAGTCCAAAAGAACCACCCCAATTTGGACACCCAAAGGGCCCAAAATTGTGAGGTGATGTGTTCTCACAAAGAAGGTATGGTTACTGAGAAGAGTTTTTACACAGGCTCGCTTAGAGACACTCTACACAGGACAGTTTCCCTTCCTGTTGATGCTGTGGATGTTTAG 2205 0.415 MNELETTDSSASEFVEVDPTGRYGRYNEILGKGASKTVYRAFDEYQGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTLKHRNIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRQKHKRVNIRAVKHWCRQILRGLLYLHSHDPPVIHRDLKCDNIFINGNQGEVKIGDLGLAAILRKSHAAHCVGTPEFMAPEVYEESYNELVDIYSFGMCVLEMVTFEYPYSECSHPAQIYKKVISGKKPDALYKVKDPEVRQFVEKCLATVSLRLSARELLDDPFLQIDDYEYDLGPVDSGAFDDLGPLTHQPFFDLHQSFSNMSTEYSNGFEYGDWYSHPADIEPSGIELFECHDEEASEDVDISIRGKRKDDGGIFLRLRIADKEGHIRNIYFPFDIGTDTALSVATEMVAELDITDQDVTSIADMIDGEIASLVPEWKPGPGIEETNHHLNNFFCHNCVSIHTSGGNVMEFLSHNQCGKNSQLPQCCRHGCTSMHGRFEEITFPSECDNHVRGDAPIKSSQSDCLQRQESWNHHESCELSPVESDESHSGEQFDKPVLAEDKGKKGIWENKFAHDPGNPPRSLSGNYFSAIRFLCCGPEIEYEKEVRQEMRWIKAKHNRESRELGDKRFGIATESSHTSNREHKTEQCIMPPLPQTANGVHNGIHLKPLGNIWNYESSCRSQVQKNHPNLDTQRAQNCEVMCSHKEGMVTEKSFYTGSLRDTLHRTVSLPVDAVDV* 735
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g2085 734 CDD STKc_WNK 22 281 - -
Gso3g2085 734 Gene3D Transferase(Phosphotransferase) domain 1 107 286 - -
Gso3g2085 734 Gene3D - 370 436 - -
Gso3g2085 734 Pfam Protein kinase domain 27 281 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso3g2085 734 MobiDBLite consensus disorder prediction 534 555 - -
Gso3g2085 734 Pfam Oxidative-stress-responsive kinase 1 C-terminal domain 373 427 IPR024678 GO:0004674|GO:0005524
Gso3g2085 734 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 1 721 - -
Gso3g2085 734 ProSitePatterns Serine/Threonine protein kinases active-site signature. 148 160 IPR008271 GO:0004672|GO:0006468
Gso3g2085 734 SUPERFAMILY Protein kinase-like (PK-like) 27 282 IPR011009 -
Gso3g2085 734 Gene3D Phosphorylase Kinase; domain 1 8 105 - -
Gso3g2085 734 ProSiteProfiles Protein kinase domain profile. 24 281 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso3g2085 734 SMART serkin_6 24 281 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso3g2085 734 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK1 1 721 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g2085 Gso-Chr3 46200403 46204020 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso3g2085 1 499 MAP Kinase Kinase Kinase AT3G22420 57.699 0.0 590
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Gso3g2085 Pkinase 5.7e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso3g2085 K08867 - gmx:100790554 1530.38
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g2044 19 49035177 49038609 Gso3g2085 3 46200403 46204020 GST
Gso3g2085 3 46200403 46204020 Gso10g1464 10 41035077 41038778 PCT
Gso10g1464 10 41035077 41038778 Gso3g2085 3 46200403 46204020 PCT