Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g2077 ATGGCCTCGTCTTCTTCCTTTCCCTCTCTAATGTTTGCAGTGCGGAGATGCCAACCTGAGTTGGTGGCTCCTGCTATACCCAGTACTCCCCATGAACTTAAACCACCATTATCCGACATAGATGATCAAGAAGGTCTTCGTTTCCTCGTTCCAATGATTCAGATTTATCGAAACGAGCCATCGATGGCAGAGAAAGACCCAGCTAAAGTCATTCGACAAGCACTCGCAAAAACACTTGTGTTTTATCACCCATTTGAAGGTAGGCTTAGGGAGGAGCCTGACCGAAAATTGATGGTGGATTGTACTGGGGATGGTGCCTTGTTCATCGAAGCTCATGTTGACATAACACTTGATCAGATTGGTGATGCACTCCAACCTCCATTGATCATTCCCATGCTTCCAAGAATTTATATTGTTTGA 420 0.45 MASSSSFPSLMFAVRRCQPELVAPAIPSTPHELKPPLSDIDDQEGLRFLVPMIQIYRNEPSMAEKDPAKVIRQALAKTLVFYHPFEGRLREEPDRKLMVDCTGDGALFIEAHVDITLDQIGDALQPPLIIPMLPRIYIV* 140
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g2077 139 PANTHER ALCOHOL ACYLTRANSFERASE 12 130 - -
Gso3g2077 139 Gene3D - 10 137 IPR023213 -
Gso3g2077 139 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 12 130 - -
Gso3g2077 139 Pfam Transferase family 17 132 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g2077 Gso-Chr3 46146717 46147208 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso3g2077 47 122 Monolignol Biosynthesis Gene Families AT5G48930 36.842 3.28e-11 57.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso3g2077 K19861 - gmx:100793892 277.33