Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g2076 ATGGCCTCATCATCTCCCTCTCCCTCTCCCTCTCCAATGTTCACAGTGCGAAGGTTGCAACCCGAGTTGGTGGCTCCTGCCATCCCCACTCCCCATGAACTTAAACCATTATCCGACATAGATGATCAAGAAGGTCTTCGTTTCCACATTCCTATGATACAAGTTTATCGTAACCAACCATCAATGGCAGAGAAAGACCCAGTTCAAGTGATTCGGAAAGCACTGGCAAAAACACTTGTGTTCTATTACCCTTTTGCGGGTAGGCTTAGGGAGAGGCCTGACCACAAGTTAATGGTGGATTGTACTGGAGAGGGCGTCTTGTTCATTGAGGCTGATGCTGACGTAACACTTGATCAGCTTGGTGATGCTCTCCAACCTCCATTCCCATGCTTCGAACAACTGCTATATAATGTTCCAGACTCTGAAGAAATTACTGACACTCCCCTTCTACTCATACAGGTGACACGACTCAAGTGTGGTGGTTTCATCCAGGCCCTCCGCTTGAACCACACCATGAGCGATGCAGCTGGTCTTGTACAATTCTTGAACGCATGGGCTGAAATGGCTGGAGGTGCAAAGAGTCCTTCCATTGCACCCGTGTGGCGTAGGGAGCTTCTAATGGCAAGAGATCCTCCTCGCATCACATGCAAGCATCACGAATACATGGAATTCGTAGACACCGAGATCGAGGAAGGAAGCCTTACTTTGCATGATGACGACATGGTTCTTCGATCATTCTTCTTTGGACCTTCCCAAATAGCTTCCCTTCGTCGCTTGGTTCCCCATTACTGTGCCACGTTTGATCTCATCACAGCATGCTTATGGCGTTGTCACACAAAAGCATTGAAGATAGATGCAGATAAGGATGTTCGAATGATGGTCGCCGTCAACGCACGTGCTAAGTTCAATCCTCCTTTACCTGTTGGTTATTACGGTAATGCCATTGCATACCCAGCAGCAGTCACCACAGCAGGGAAGCTTTGTGGAAATCCATTTGGGTATGCTGTGGAATTAATAAATAAAGTGAAAGGTAAGGCCACACAAGAGTATATGCATTCTGTGGCAGATCTATTGGCTATTAAGGGACGATACATACCAAGAATGGTGAGGTCTCTTACTGTGTCAGATTTGAGAGGTTTTGATCCCAGACAAATTGATTTTGGGTGGGGCCATGCTCTCTATGCTGGACCAGCTCAAGGAGGCCTTGGACCCTTTCCAGGAGTAACGTTTATCACTCCTTTTAAGAATGCAAAAGGAGAAGATGGTTTAGTATTGCCGATTTGGTTGCCCACAGAGGCTATGAATAGGTTTTCCAAAGAGTTGGATGGCATGTTTGGTTTCATTTGTAGCTCATTATGA 1359 0.465 MASSSPSPSPSPMFTVRRLQPELVAPAIPTPHELKPLSDIDDQEGLRFHIPMIQVYRNQPSMAEKDPVQVIRKALAKTLVFYYPFAGRLRERPDHKLMVDCTGEGVLFIEADADVTLDQLGDALQPPFPCFEQLLYNVPDSEEITDTPLLLIQVTRLKCGGFIQALRLNHTMSDAAGLVQFLNAWAEMAGGAKSPSIAPVWRRELLMARDPPRITCKHHEYMEFVDTEIEEGSLTLHDDDMVLRSFFFGPSQIASLRRLVPHYCATFDLITACLWRCHTKALKIDADKDVRMMVAVNARAKFNPPLPVGYYGNAIAYPAAVTTAGKLCGNPFGYAVELINKVKGKATQEYMHSVADLLAIKGRYIPRMVRSLTVSDLRGFDPRQIDFGWGHALYAGPAQGGLGPFPGVTFITPFKNAKGEDGLVLPIWLPTEAMNRFSKELDGMFGFICSSL* 453
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g2076 452 Pfam Transferase family 19 441 - -
Gso3g2076 452 Gene3D - 227 441 IPR023213 -
Gso3g2076 452 Gene3D - 12 223 IPR023213 -
Gso3g2076 452 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 14 445 - -
Gso3g2076 452 PANTHER ALCOHOL ACYLTRANSFERASE 14 445 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g2076 Gso-Chr3 46142033 46143707 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso3g2076 47 441 Monolignol Biosynthesis Gene Families AT5G48930 30.882 4.67e-54 184
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso3g2076 K19861 - gmx:100793362 922.154