Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g2074 ATGGCTTTATCATCTCCCTCTCTAGTGTTCACCGTACAGAGGTGTCAACCGGAGCTGGTGGCTCCTGCTAAACCCACTCCTCGCGAAGTTAAACCCCTCTCCGACATAGATGACCAACAGGGCTTGCGTTTCCAAATTCCATTCATACTATTCTATGGTAATGAACCATCAATGGCAGGGAAAGACCCTGCTAAGGTCATTAGAGAGGCACTTGCGCAAACTCTTGTTTTTTACTACCCTTTTGCGGGTAGGATTAGGGAGGGACCTGGTAGAAAATTGGTGGTGGATTGTACTGGAGAGGGTGTCATGTTCATTGAGGCTGATGCAGATGCAACACTTGATCAATTGGGTGACACACTTCAACCTCCATTCCCATGCTTCGAACAACTCCTTTATGATGTTCCAGGCTCGGAGGGAGTTATTGACTGTCCCCTAATGCTCTTTCAGGTGACACGTTTCAAGTGTGGTGGTTTTGCCCTAGCCGTTCGCTTGAACCACACTATGAGCGACGGAGCCGGCATAGCACTATTCATGAACACATTAGCTGAAATGGCTCAGGGAGCAACTGAACCTTCCGTTCCACCTGTGTGGCGCCGGGAGCTTCTACAGGCAAGAGATCCACCTCACATCACATGCAACCATCGTGAATACGAGCAAATCCCAAACAACATGGAAGGGATCATCCCTTCATACGAGAACAAGATGGTTCTTCGATCTTTCTTCTTTGGAGCCTCCGACATAGCTGCCCTACGTCGCTTGGTTCCCCACTACCATAGAAAATGCACCAGTTTCGATCTCATCACGGCATGCTTCTGGCGCTGTCGCACAAAAGCATTGGAGATAGATGCAGACGAGGATGTTCGCATGATGGTCATAGTCAACGCACGTGCTAGGTTTAATCCTCCATTACCTGCTGGTTACTACGGCAATGCCTTTGCATACCCCGCGGCAGTTACCACCGCAGGGAAGCTTTGTGAAAATCCATTTGGGTATGCAGTGGAGTTAATAAATAAACTGAAAGGTGAGGTGACAGAAGAATACATGCATTCTGTGGCAGATCTAATGGTGACTAATGGAAGATGCTTGTTTACCACCGTGAGATCTTTTATTGTGTCAGATTTGAGACATTTTGGTTTCAAACAAATTGATTTTGGGTGGGGTAGGGCATTATATGGTGGAGTGGCCAAAGGTGGGGCTGGACCCTTTCCTGCAGTATTCTATCTGATGGCACATAAGAATGCAAAAGGAGAAGAAGGCATATTATTACCAATTTGGTTGCCCGCCAAAGCTATGGACAAGTTTGCAAACGAGTTAGATCACATGCTAATTGGGAACCAAAACCAACCTACGGATCCACATCCAATTTTTTACGCGTCTACCTTGGAAAATATTAAGTGGACACCCAAAAAGTTGATTGGCACCCAGTGA 1428 0.4685 MALSSPSLVFTVQRCQPELVAPAKPTPREVKPLSDIDDQQGLRFQIPFILFYGNEPSMAGKDPAKVIREALAQTLVFYYPFAGRIREGPGRKLVVDCTGEGVMFIEADADATLDQLGDTLQPPFPCFEQLLYDVPGSEGVIDCPLMLFQVTRFKCGGFALAVRLNHTMSDGAGIALFMNTLAEMAQGATEPSVPPVWRRELLQARDPPHITCNHREYEQIPNNMEGIIPSYENKMVLRSFFFGASDIAALRRLVPHYHRKCTSFDLITACFWRCRTKALEIDADEDVRMMVIVNARARFNPPLPAGYYGNAFAYPAAVTTAGKLCENPFGYAVELINKLKGEVTEEYMHSVADLMVTNGRCLFTTVRSFIVSDLRHFGFKQIDFGWGRALYGGVAKGGAGPFPAVFYLMAHKNAKGEEGILLPIWLPAKAMDKFANELDHMLIGNQNQPTDPHPIFYASTLENIKWTPKKLIGTQ* 476
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g2074 475 PANTHER ALCOHOL ACYLTRANSFERASE 10 444 - -
Gso3g2074 475 Gene3D - 11 219 IPR023213 -
Gso3g2074 475 Gene3D - 220 437 IPR023213 -
Gso3g2074 475 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 10 444 - -
Gso3g2074 475 Pfam Transferase family 12 440 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g2074 Gso-Chr3 46120100 46123099 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso3g2074 43 424 Monolignol Biosynthesis Gene Families AT5G48930 29.620 1.01e-50 176
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso3g2074 K19861 - gmx:100787907 974.926