Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g2064 ATGGGTGGTGAATTAAGTTACGTGCTTTCAAAAATGGAAATGCTAACTTCAGATCATGCCTCCGTTGTGTCCATGAACATTTTCGTGGCTCTGCTTTGTGCTTGCATTGTCATTGGCCATCTTCTTGAGGAGAATCGGTGGCTGAATGAGTCTATCACTGCCCTTTTGATAGGTATTTGCACTGGGGTAGTCATTTTGTTGTTGAGTCGCGGTAAAAGCTCGCATCTTCTAGTTTTCAGTGAAGATCTTTTCTTTATATACCTTCTGCCACCTATCATATTTAATGCCGGGTTTCAGGTTAAAAAGAAACAGTTTTTTGTTAACTTCATTACCATTACCCTGTTTGGAGCTGTTGGTACATTAATAAGTTGTAGCATCATAACTTTTGGTGTCACGCAAATTTTTAAGAGAATGGGTGTTGGTAAATCACTGGATATGGGGGATTATCTAGCAATTGGTGCAATATTTGCTGCAACAGATTCTGTCTGCACATTGCAGGTGCTAAACCAGGATGAGACACCTTTACTGTACAGTCTTGTATTTGGCGAGGGTGTTGTGAATGATGCTACATCTGTGGTGCTTTTCAATGCAATCAAAAGTTTTGACCTCAACAAAATTGACCACAGAATTGGTTTGCATTTTTTTGGCAACTTCTTGTATCTGTTTACCACAAGCACCTTGCTTGGGGTCTTGGCTGGTCTACTTAGCGCTTACATTATTAAAACGCTGTATATTGGCAGGCACTCTACAGATCGTGAGGTTGCTCTTATGATGCTAATGGCATACCTTTCCTACATTCTGGCTGAATTATGGTATCTGAGTGGCATTCTCACTGTATTCTTCTGTGGGATTGTTATGTCTCATTATACTTGGCATAATGTGACTGAGAGCTCGAGAATAACTACCAAACATGCTTTTGCAACTCTCTCATTTGTTCTTGAAACCTTTATCTTCCTTTATGTTGGTATGGATGCCTTGGACATTGAAAAGTGGAGGTTTGTTAGTGATAGGCCTAAAACATCTGTTGCTGTGAGTTCAGTTTTATTGGGTCTAGTGCTTGCTGGAAGAGCAGCCTTTGTTTTTCCCCTATCCTTCTTATCCAACCTCACTAAAAAGACGCAAAGTGAAAAAATAAGTTTCAGGGAGCAGGTGATAATTTGGTGGGCTGGTCTTATGAGAGGTGCTGTTTCAATGGCACTTGCCTACAATCAGTTCACCTTGTCCGGTCACACTGAACTGCGAACCAATGCCATCATGATCACCAGCACCATTACTGTTGTGCTTGTCAGCACAATGGTGTTTGGTTTGATGACTAAGCCACTCATAAGGTTTTTGCTGCCTATTAACCCCCCTCCTAAACGCAAAAACAGCATGTCAGATATAGGTTCATTTAATAATTCCCCCAAATCAATCACTATGCCCTTTCTTGGAGGCTCCCAAGATTCTGAAAACGAATTTGATGGCAGTGAAAATCAACGTCCAAGCAGTATTCGTGCCTTACTAACAACTCCAACACATACCGTTCATCAACTATGGCGTAATTTTGATAATTCATTTATGCGTCCAGTTTTTGGTGGTAGGGGATTTGTTCCTGTAGTTCCTACCTCAACAACCGCTCGCACCATTAATCAACAATGGCATTAA 1644 0.41 MGGELSYVLSKMEMLTSDHASVVSMNIFVALLCACIVIGHLLEENRWLNESITALLIGICTGVVILLLSRGKSSHLLVFSEDLFFIYLLPPIIFNAGFQVKKKQFFVNFITITLFGAVGTLISCSIITFGVTQIFKRMGVGKSLDMGDYLAIGAIFAATDSVCTLQVLNQDETPLLYSLVFGEGVVNDATSVVLFNAIKSFDLNKIDHRIGLHFFGNFLYLFTTSTLLGVLAGLLSAYIIKTLYIGRHSTDREVALMMLMAYLSYILAELWYLSGILTVFFCGIVMSHYTWHNVTESSRITTKHAFATLSFVLETFIFLYVGMDALDIEKWRFVSDRPKTSVAVSSVLLGLVLAGRAAFVFPLSFLSNLTKKTQSEKISFREQVIIWWAGLMRGAVSMALAYNQFTLSGHTELRTNAIMITSTITVVLVSTMVFGLMTKPLIRFLLPINPPPKRKNSMSDIGSFNNSPKSITMPFLGGSQDSENEFDGSENQRPSSIRALLTTPTHTVHQLWRNFDNSFMRPVFGGRGFVPVVPTSTTARTINQQWH* 548
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g2064 547 Gene3D - 143 197 - -
Gso3g2064 547 PRINTS Na+/H+ exchanger signature 83 94 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
Gso3g2064 547 PRINTS Na+/H+ exchanger signature 97 111 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
Gso3g2064 547 PRINTS Na+/H+ exchanger signature 112 120 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
Gso3g2064 547 PRINTS Na+/H+ exchanger signature 153 163 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
Gso3g2064 547 PANTHER SODIUM/HYDROGEN EXCHANGER 9 546 IPR018422 GO:0006812|GO:0015299|GO:0016021
Gso3g2064 547 Pfam Sodium/hydrogen exchanger family 27 442 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Gso3g2064 547 PANTHER SODIUM/HYDROGEN EXCHANGER 2 9 546 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g2064 Gso-Chr3 46008736 46013334 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso3g2064 16 541 Antiporters AT3G05030 76.136 0.0 816
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso3g2064 - - gmx:100789667 1040.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g2024 19 48813569 48816392 Gso3g2064 3 46008736 46013334 GST
Gso3g2064 3 46008736 46013334 Gso10g1446 10 40840045 40846501 PCT
Gso10g1446 10 40840045 40846501 Gso3g2064 3 46008736 46013334 PCT