Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g2057 ATGGAGTGCAACAAGGATGAGGCTATAAGGGCTAGGCAGATTGCTGAAAATAAGATGCAAGCTGGTGACTTTGAAGGGGGGCTGAAATTTGCTACGAAAGCCCAAAGGCTGTTTCCTGAGATTCAGAACATTCTTCAGATCCTTGCTGTTTGTGAGGTTCACTGTGCTGCACAGAAGAAACACTCTGGGTCTGACATGGACTGGTATGGAATTCTTAAGATTGAAAAGTCCGCCGATGAAGCAACCATAAAGAAACAGTATAGGAAGCTTGCACTGCTACTTCATCCTGACAAAAATAAATCTGATGGTGCAGAGGCTGCTTTCAAGTTGATTGGTGAAGCTAACAGAGTGTTGAGTGACCAAACAAAGCGTGCTTTGTATGACTTAAAGTTTGGAGTTCCTGTGGGAAATACAGCAGCTAAGGTTCCACCTCGTCACCCAAATGGAAATGCTTCCGGGATGGGATGTGATGGCACTGCAAGAAATTATCAGAACAGTTTTTCTTCACAATACCAAGCTTGGAATTCATATCATCGGACTGATAATCAGACATTCTGGACATGTTGCCCTCATTGTAATACTAGATATCAATATGTCATAACCATTTTAAATCATACCATACGCTGTCAACATTGTTCTAAATCCTTTACAGCTCATGATATGGGGAACCACAACGTGTCACCAGGATATTGGTCACCATTTAATAACCAGAAAGAGCCTCCAAAACATGCATCGTCAAAAGAAGCTTCAAAAAGCAATGGTGGAAAGTCTTCTGGTAGAGAACAGGAGGGTGTATCCATGTCAAAATGCTCTGCTGGTATTGGTACCCATTCTAAAGTTGCAAAGAGAAGAGATAGTCATGCGGCTGCAGGAGTGACAAAGGCTGGTGTTGGGATGTCCAATCCCACTAATACCAAAGCCAAGGAATCGCAAGCCTCAACAAAGGTTGGACATAAGAGAGCAAGGCAGTCAACATCAGATGATGATAACAAAGCTGCAAATGGTAAAGGCGTGAAAGATGCTAAGGTTCAAAAAAATAGGGTTGATCCTAATAGGAGATCTTCAAGGAAAAAACAGCATGTTTCATACACAGAAAATGATAAAGATGGTGATTTTGGGAATTCTTCCAAAAGGCCAAGGCACCATGAATCCAGTAACAACAATCCAGCCTCTTTTACTGACGGTGTGGGTGGTCAGAATGGAAAGATAAGAAATAAAGCAAGTGCACCGCCTGAAGAAACTGTTTTAAGGAATAAGACCAAAGTTGAGCAGACAAATGTGCTAAGAAAGGAGGCATCCAACTCAGATCTTAATGATAGAAAGTCAAAAGCTGACAATTGTTCTCCACTGAAGTCAAATTTACCTCCCAGTTCAGAGATTTGCTGTCCTGATCCAGACTTCAGTGATTTTGAGAGAGATAAGGCAGAGGGTTGTTTTGCTGTTAATCAATTATGGGCCATTTTTGATAATACTGATAGTATGCCAAGATTCTATGCTCTCGTCAAGAAAGTGTACTTCCCTTTCAAGTTGCGGATTACTTGGCTGGAACCTGACTCAGATGACCAAGGTGAGATTGACTGGCATGAAGCAGGCTTGCCTGTTGCTTGTGGTAAGTTCAAACTTGGTCAGTCTCAGAGAACTTCAGACCGCTTTATGTTCTCTCATCAGGTGCATTGCATAAAAGGAAGTGACAGTGGTACTTATCTGGTATATCCAAAGAAGGGAGAAACTTGGGCAATTTTCAGACATTGGGATCTTGGATGGAGTTCTGATCCAGAAAAGCATTCGGAGTATCAATTTGAATATGTGGAAGTTCTATCTGATTTTGATGAAAATGCCGGCATTAAAGTTGCTTATCTTAGCAAACTGAAAGGGTTTGTTAGTCTCTTCCAGCGAACTGTGCTAAACAGAATTAGCTTATTTTGTATTTTACCTAATGAGCTTTATAAGTTCTCTCACCGGATTCCTTCATATAAGATGACAGGTGCTGAAAGGCAAGATGTTCCAAGAGGATCTTTTGAACTTGATCCTGCTGGTCTGCCTAATAGTCTTTCTGAAGTTGGTGATCCTGGTGTTGTGAAGATGGATGGAGTCAATTGTTCGCACCATGAATACTCGAAGTGTAAAGTTGAAGAGGCAATGTCTAATGATAGTATTCACAAAGCAAAGTTGCGAGAGAGTATTGGTTCTGAAAGAGTAGCACAAATCCTCAGAAGATCACCAAGGTCAAGTCAAAAAAGTATGGACAATGGTCAAGCAAACACTAGTCAATATACAGTCAGAAAGGATGACATAAACATTGGCCACAGGGATGACAGTCCACCAGAGGGAAACACTGCTGCATTTCAGACTATTAAGAGGAAGGTCAAGACACCTCAGAAACATGAGAAAAATAATTATGAAGGAGAGGCATTGAAAGCCCGAAAGTCACCTAGAGATTTAAGCAAGAAAAATGCTCAAGGAGATGCAGGTGAATGGACAGCAGGCAAGAAGACTGATAACCATTCAAGCAACAGCAAAAATGTGAAGGTCAGCAATATTCCTCAGTCAGTGGGAGCATCATGTTATGGCTTTAAGAAGGAAAAATCTGAAGAGATGTTTCAGTGTGGCCAGATATGGGCAATATATGGTGATAGGGATCATATGCCTGATACTTATGCTCAAATTAGGATGATTGAATGCACTCCTAATTTTAGATTGCAGGTGTACATGCTTGAACCCTGCCCACCACCAAATGACTTAAAAAGAACAATATCTTGTGGCACCTTTTCAGTTAAAGAAGCCAAATTACGGATGCTTTCTCTCTCTGCATTCTCTCATCAATTAAAAGCTGAACTTGTGGCAAATAATAGATATGAAATTTATCCTAGAAAATGTGAGATTTGGGCTCTATACAAGGACCAGAACTATGAACTGACTTCTTCAAATCAGGGCAGAGGTGAATGTCATATAGTAGAAGTATTAGCTGATAGTTACCAGAGTATCCAAGTTGTTGTTCTAGTGCCGCATGGCAACTCTGGGACAATTTTCAAGGCTCCTAGAATCCAGAGATCTAAAACTGGTGTAATTGAAATATTAAGAAAAGAGGTTGGCAGATTTTCACATCAGATTCCTGCTTTTCAGCACAGCGACAATGTTCATCTCAGAGGGTGTTGGGAGCTTGATCCTTCATCAGTTCCTGGTTCTTTCATACCAATAGACTGA 3204 0.4092 MECNKDEAIRARQIAENKMQAGDFEGGLKFATKAQRLFPEIQNILQILAVCEVHCAAQKKHSGSDMDWYGILKIEKSADEATIKKQYRKLALLLHPDKNKSDGAEAAFKLIGEANRVLSDQTKRALYDLKFGVPVGNTAAKVPPRHPNGNASGMGCDGTARNYQNSFSSQYQAWNSYHRTDNQTFWTCCPHCNTRYQYVITILNHTIRCQHCSKSFTAHDMGNHNVSPGYWSPFNNQKEPPKHASSKEASKSNGGKSSGREQEGVSMSKCSAGIGTHSKVAKRRDSHAAAGVTKAGVGMSNPTNTKAKESQASTKVGHKRARQSTSDDDNKAANGKGVKDAKVQKNRVDPNRRSSRKKQHVSYTENDKDGDFGNSSKRPRHHESSNNNPASFTDGVGGQNGKIRNKASAPPEETVLRNKTKVEQTNVLRKEASNSDLNDRKSKADNCSPLKSNLPPSSEICCPDPDFSDFERDKAEGCFAVNQLWAIFDNTDSMPRFYALVKKVYFPFKLRITWLEPDSDDQGEIDWHEAGLPVACGKFKLGQSQRTSDRFMFSHQVHCIKGSDSGTYLVYPKKGETWAIFRHWDLGWSSDPEKHSEYQFEYVEVLSDFDENAGIKVAYLSKLKGFVSLFQRTVLNRISLFCILPNELYKFSHRIPSYKMTGAERQDVPRGSFELDPAGLPNSLSEVGDPGVVKMDGVNCSHHEYSKCKVEEAMSNDSIHKAKLRESIGSERVAQILRRSPRSSQKSMDNGQANTSQYTVRKDDINIGHRDDSPPEGNTAAFQTIKRKVKTPQKHEKNNYEGEALKARKSPRDLSKKNAQGDAGEWTAGKKTDNHSSNSKNVKVSNIPQSVGASCYGFKKEKSEEMFQCGQIWAIYGDRDHMPDTYAQIRMIECTPNFRLQVYMLEPCPPPNDLKRTISCGTFSVKEAKLRMLSLSAFSHQLKAELVANNRYEIYPRKCEIWALYKDQNYELTSSNQGRGECHIVEVLADSYQSIQVVVLVPHGNSGTIFKAPRIQRSKTGVIEILRKEVGRFSHQIPAFQHSDNVHLRGCWELDPSSVPGSFIPID* 1068
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g2057 1067 ProSiteProfiles dnaJ domain profile. 67 131 IPR001623 -
Gso3g2057 1067 MobiDBLite consensus disorder prediction 312 384 - -
Gso3g2057 1067 Gene3D DnaJ domain 52 137 IPR036869 -
Gso3g2057 1067 CDD DnaJ 67 120 IPR001623 -
Gso3g2057 1067 MobiDBLite consensus disorder prediction 794 819 - -
Gso3g2057 1067 Pfam DnaJ domain 67 128 IPR001623 -
Gso3g2057 1067 SUPERFAMILY Chaperone J-domain 64 130 IPR036869 -
Gso3g2057 1067 Pfam Domain of unknown function (DUF3444) 855 1043 IPR024593 -
Gso3g2057 1067 Pfam Domain of unknown function (DUF3444) 458 664 IPR024593 -
Gso3g2057 1067 MobiDBLite consensus disorder prediction 247 273 - -
Gso3g2057 1067 PANTHER - 742 1062 - -
Gso3g2057 1067 PANTHER - 1 693 - -
Gso3g2057 1067 PRINTS DnaJ domain signature 69 87 IPR001623 -
Gso3g2057 1067 PRINTS DnaJ domain signature 87 102 IPR001623 -
Gso3g2057 1067 PRINTS DnaJ domain signature 103 123 IPR001623 -
Gso3g2057 1067 MobiDBLite consensus disorder prediction 297 311 - -
Gso3g2057 1067 PANTHER DNAJ HEAT SHOCK AMINO-TERMINAL DOMAIN PROTEIN 742 1062 - -
Gso3g2057 1067 PANTHER DNAJ HEAT SHOCK AMINO-TERMINAL DOMAIN PROTEIN 1 693 - -
Gso3g2057 1067 MobiDBLite consensus disorder prediction 228 451 - -
Gso3g2057 1067 MobiDBLite consensus disorder prediction 738 762 - -
Gso3g2057 1067 MobiDBLite consensus disorder prediction 738 843 - -
Gso3g2057 1067 SMART dnaj_3 66 123 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g2057 Gso-Chr3 45960175 45964862 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso3g2057 4 221 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 33.184 3.67e-26 109
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso3g2057 - - gmx:100782762 2197.93
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g2017 19 48772475 48778039 Gso3g2057 3 45960175 45964862 GST
Gso3g2057 3 45960175 45964862 Gso10g1442 10 40807118 40809234 PCT
Gso10g1442 10 40807118 40809234 Gso3g2057 3 45960175 45964862 PCT