Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g2033 ATGGCAGTGGCATCCTCCTTCATCATCATCATCATCGTCATCATCGCTCTCATCTTCTTCTCCCTAAACCCTCCTCCTTCACCATCACGTAGGTCACTTCTCCTCACCACTTCATCGTCTTGCTCCAACGAATCCAATGGCCTTCTCAACTACCACTGCATCTTCCCCCAAACTTCCTCTTTCTCAATCCCCTCCCTCTCGCTCTTCCTCCTCCTCCACTTCTACATCCTCATCACCACCGCGCAGCACCACTTCTCCCTCGTCACCACAAAGCTCGCCTCGCACCTCAACCTCTCCCCCAGCATGGCCGCCGTCACGCTCCTCTCCCTCGGCAACGGCGCCCCCGACGTCTTTTCTTCCCTCGCCGCCCTCCGCGCCGGTCAGTACCGCACCGGCTTCGGCGCCATTCTCTCCGCCGGCGCCTTCGTCTCCGCCCTCGTCGTCGGCTTCGTCGCCATCTACGCTGCTCCGTTTTCCGTCGATCCCGCGCCCTTCGTTAGAGACGTGCTCTTCTACTTGACCGCCGCAATGTTCCTCTTCTATGTGTACCTCAGCGCCGAGATTTTCCTCTGGCAGGCCGTCGGATTCGTTGGATTTTACTTGTTCTTCGTCGGATTTGTGTTTTACATGGATTTGGGGATGGCGGATCGCAGAGAGAAGAGTTCCGAGGATCTCGAGGGACAGAAGGAACCTGATTCCGACGATGTCAAGGTTTCCGAATCTTCCGTGGGAGAGAAACGCGCTTCTTCTGGATTGCGTGGAGCTATTCGATTGATTTCTAAAACATGGGAGCTTCCTGTCAAAACTCTCCTGAGATTGACAATCCCTCAACCAGCACCTTCACAATGGAGTAGATTTTATGCATCGGCCAATATTGCACTCTGTCCGCTAGCCCTCTTGTATGCCTGCAACTCATTCATGCCATTTAATCATCCCATAGTTTTCCTCCTCCCCAACTCTCACGTCCCCCTCTGGTCAGTAGTGCTCATGACAAGTTTCTCTCTTGCACTTTTTCACTATGTAATGGAAAAAGAACCCCCCAAGACAGAGCATATGCCTGTGGTCATCGTGGCATTTGTGATGAGTGTGTTTTGGATATCTACTACAGCCGGAGAGCTGGTGAACTGCCTAGAAGCTATAGGTGTGCTTCTTGAACTGCCGCCAGCACTCCTGGGTCTCACAGTGCTGGCGTGGGGAAATTCAGTGGGAGATCTTGTTGCAGATGTTGCAGTTGCTAAAGCCGGTCATCCAGCTATGGCAATGGCGGGATGCTTTGCAGGACCAATGTTTAACATGCTTGTTGGCCTTGGAACTGCTTTGGTCATACAGACGGCCAATATATATCCTAGAGCATATCAGCTTAATTTCCACGTTGGTATCGTGATTGCATTTGTATTCCTTCTTTTAAGCCTTATGGGGTCTCTCTTGGTGATCACTTGGTGCAGATTCAGAGTGCCTAGGTTTTGGGGCTTCTGTCTGGTAGGCATCTATGTTGCTTTTACGGCAGTGAGTTTAGTAATAGCCATGTTTTCAGGGTGA 1539 0.5166 MAVASSFIIIIIVIIALIFFSLNPPPSPSRRSLLLTTSSSCSNESNGLLNYHCIFPQTSSFSIPSLSLFLLLHFYILITTAQHHFSLVTTKLASHLNLSPSMAAVTLLSLGNGAPDVFSSLAALRAGQYRTGFGAILSAGAFVSALVVGFVAIYAAPFSVDPAPFVRDVLFYLTAAMFLFYVYLSAEIFLWQAVGFVGFYLFFVGFVFYMDLGMADRREKSSEDLEGQKEPDSDDVKVSESSVGEKRASSGLRGAIRLISKTWELPVKTLLRLTIPQPAPSQWSRFYASANIALCPLALLYACNSFMPFNHPIVFLLPNSHVPLWSVVLMTSFSLALFHYVMEKEPPKTEHMPVVIVAFVMSVFWISTTAGELVNCLEAIGVLLELPPALLGLTVLAWGNSVGDLVADVAVAKAGHPAMAMAGCFAGPMFNMLVGLGTALVIQTANIYPRAYQLNFHVGIVIAFVFLLLSLMGSLLVITWCRFRVPRFWGFCLVGIYVAFTAVSLVIAMFSG* 513
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g2033 512 Gene3D - 288 506 IPR044880 -
Gso3g2033 512 Gene3D - 98 229 IPR044880 -
Gso3g2033 512 PANTHER NA+/CA2+ K+ INDEPENDENT EXCHANGER 37 234 - -
Gso3g2033 512 PANTHER NA+/CA2+ K+ INDEPENDENT EXCHANGER 259 511 - -
Gso3g2033 512 MobiDBLite consensus disorder prediction 221 245 - -
Gso3g2033 512 MobiDBLite consensus disorder prediction 221 242 - -
Gso3g2033 512 Pfam Sodium/calcium exchanger protein 67 208 IPR004837 GO:0016021|GO:0055085
Gso3g2033 512 Pfam Sodium/calcium exchanger protein 355 505 IPR004837 GO:0016021|GO:0055085
Gso3g2033 512 PANTHER MITOCHONDRIAL SODIUM/CALCIUM EXCHANGER PROTEIN 259 511 - -
Gso3g2033 512 PANTHER MITOCHONDRIAL SODIUM/CALCIUM EXCHANGER PROTEIN 37 234 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g2033 Gso-Chr3 45745953 45749144 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso3g2033 29 511 Antiporters AT1G08960 69.556 0.0 646
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso3g2033 K13754 - gmx:100775437 894.034