Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g2022 ATGGACGATCAAATCATTGAGATGCTTACAGAAAAGTTCAATCGATTCGGTATTAATTGCAATTTGAAGCCGTCATCAGAGCCACAGCCAAGCGTATCAACTGAAGCTTGTGATGAAACAGATAATGTATTAGCACAACTGAACAATGAGACCTCTGACAATATGGATGAGAGTAGTATATCCAATGGAATCCGTGAATGTTCTCCTGATGAGGATCGTACACTCCCAATATTGAAGAAAATCCTTGACTTGAGTACTAAAATTCAGAATTTGAAGAAACAACATGTAGCCCTATCTGATCAAGTGAAACTCACAGCTGAGTCATTTACAGGCCTAGATGTTTTAAAGTCTGTTCAGCTTCTTGGTACTGAATATGAAGTGTTGAAAAGGAAGTACCTAGAGGAGTCCTCTGAGCGTAGGCGGCTTTACAACAAAGTGATTGAACTAAAGGGAAATATCAGAGTTTTCTGTAGATGCAGACCACTAAATGAAAGTGAAATTGCAAATGGATCAGCACTATCTGTTGTCAATTTTGAGTCAACTTCTGATGGGCTTCAAGTCATTTGCTCTGATTCTTCAAAAAAGCACTTTAAATTTGATTATGTATTCAGACCTGAAGATAACCAAGAGACTGTTTTCGAACAAACAATACCTATCGTCACATCTGTATTAGATGGGTATAATGTTTGCATTTTTGCATATGGTCAAACTGGAACCGGCAAGACCTTTACTATGGAAGGAACACCACAGCATAGGGGAGTTAACTATAGAACCCTGGAGGAATTATTTCGAATATCTGAAGAGAGAAATGACGTAATAAAATATGAATTGTTTGTTAGCATGTTGGAGGTTTACAATGAGAAGATAAGAGATCTTTTGGTGGAAAATTCAGTTGAACCTACTAAGAAGTTGGAGATAAAGCAAGCTGCAGATGGAACCCAAGAAGTCCCAGGACTCGTTGAAGCTTGTGTTTATGGAACAGATGACGTGTGGGAAAAGCTGAAGTCTGGTAACCGAGCCAGATCTGTTGGATCCACTAGTGCTAATGAGCTTAGCAGTCGTTCTCATTGTTTGTTGCGAGTGACTGTTTTAGGGGAGAATTTAATCAATGGCCAGAAAACAAGGAGTCACCTTTGGCTAGTAGATTTAGCTGGCAGTGAGCGTGTGGTGAAAACTGAAGCTGAAGGAGAAAGACTGAAGGAATCTCAATTCATAAACAAGTCTCTATCAGCACTTGGTGATGTTATTTCTGCCCTTGCATCCAAATCAGCCCACATACCTTACAGGAACTCAAAGCTCACCCATATACTCCAGAGCTCTTTAGGAGGTGATTGCAAAACTTTAATGTTTGTCCAGATAAGTCCAAGTGCAGCAGACTTAACAGAGACACTTTGTTCTCTGAATTTTGCCGCACGTGTACGAGGAATTGAGAGTGGCCCAGCCCGCAAGCAAACAGACCTTACTGAACTGAATAAGTACAAGCAAATGGTAGAAAAGGTCAAACATGATGAGAAGGAAACTAGAAAATTACAAGATAACTTGCAGTCATTGCAAATGAGACTTACTTCAAGAGAACTCATGTGCCGAAATCTTCAAGAAAAGGTTCGGGATCTTGAGAACCAGGTGACAGGGGAGAGAAAAATGAGACTGAAACACGAAAATATATTGCTTGCAGCAGTTTCAGCTCAACCTTCAACAATGTGGGAGTCAATAGCTTCTGATCAGAAAATCATGAAGAAGCCACCGCTCGATCCAAGACTGCCACTTAGAAGAATTACTAACATTTTGCCTCCACCACCAGAGAGAAGGCCCTCATACAGCCCTTCTATGGATGAACAGGAAAACGTTGCTAGAACAACTTCAATTAACGCACAAGACCTTGTGAAACCAAGAAGGGGGGTATCCATAGCGGTAAGACCCCCACCCCCACCATCAACATCACAGTCCCTTCAGCCAAGAAGGAGGCGTGTTTCCGTAGCTACACTGTGTCCTGTCAGAACTCCACTCTGTTCCCCCACTCGGCAATCACTGATAAGGCCCTCATGCAGCTCTTCCATGGATGGACAGGAAAGCGTTGCCAAAACAACCTCAATTAACACGCAAGACCTTATGAAACCAAGAAGAAGGGGGGTATCCATAGCTGTAAGACCCCCACCCCCACCATCAACATCACAAGCCCGTCAGCCTAGAAGGAGGCGTGTTTCTGTAGCTGCTCTGTGTCCTGTCAGAACTCCACTCCGTTTCCCCACTCAGCAATCACCGAAAAGGAACCAAAGGGAAGCTCAGTATTCAAGGTTGTTTGCCATATTGCCAGAAGCTAGAACCTCAGTTGAGACAGCATCACCAACTTTGATGAGGAGCAGCAGTAAGTTTGCTGGCAGCCCGAGGCATCCAAGACGCAAACCTTTAGTGTGGACTCCTCTCAAGCAGAAGGGGGGCTTGAAAATTAGCAGCAGAAAGTCATTGGTTATACCATCTCGGCCCTTCTACTGA 2493 0.4304 MDDQIIEMLTEKFNRFGINCNLKPSSEPQPSVSTEACDETDNVLAQLNNETSDNMDESSISNGIRECSPDEDRTLPILKKILDLSTKIQNLKKQHVALSDQVKLTAESFTGLDVLKSVQLLGTEYEVLKRKYLEESSERRRLYNKVIELKGNIRVFCRCRPLNESEIANGSALSVVNFESTSDGLQVICSDSSKKHFKFDYVFRPEDNQETVFEQTIPIVTSVLDGYNVCIFAYGQTGTGKTFTMEGTPQHRGVNYRTLEELFRISEERNDVIKYELFVSMLEVYNEKIRDLLVENSVEPTKKLEIKQAADGTQEVPGLVEACVYGTDDVWEKLKSGNRARSVGSTSANELSSRSHCLLRVTVLGENLINGQKTRSHLWLVDLAGSERVVKTEAEGERLKESQFINKSLSALGDVISALASKSAHIPYRNSKLTHILQSSLGGDCKTLMFVQISPSAADLTETLCSLNFAARVRGIESGPARKQTDLTELNKYKQMVEKVKHDEKETRKLQDNLQSLQMRLTSRELMCRNLQEKVRDLENQVTGERKMRLKHENILLAAVSAQPSTMWESIASDQKIMKKPPLDPRLPLRRITNILPPPPERRPSYSPSMDEQENVARTTSINAQDLVKPRRGVSIAVRPPPPPSTSQSLQPRRRRVSVATLCPVRTPLCSPTRQSLIRPSCSSSMDGQESVAKTTSINTQDLMKPRRRGVSIAVRPPPPPSTSQARQPRRRRVSVAALCPVRTPLRFPTQQSPKRNQREAQYSRLFAILPEARTSVETASPTLMRSSSKFAGSPRHPRRKPLVWTPLKQKGGLKISSRKSLVIPSRPFY* 831
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g2022 830 Coils Coil 81 101 - -
Gso3g2022 830 ProSiteProfiles Kinesin motor domain profile. 152 476 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gso3g2022 830 MobiDBLite consensus disorder prediction 609 626 - -
Gso3g2022 830 Coils Coil 493 548 - -
Gso3g2022 830 PANTHER KINESIN-RELATED 89 669 IPR027640 GO:0003777|GO:0007018
Gso3g2022 830 PANTHER KINESIN-RELATED 674 821 IPR027640 GO:0003777|GO:0007018
Gso3g2022 830 PRINTS Kinesin heavy chain signature 226 247 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gso3g2022 830 PRINTS Kinesin heavy chain signature 346 363 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gso3g2022 830 PRINTS Kinesin heavy chain signature 377 395 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gso3g2022 830 PRINTS Kinesin heavy chain signature 426 447 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gso3g2022 830 SMART kinesin_4 150 484 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gso3g2022 830 PANTHER KINESIN-LIKE PROTEIN KIN-14S 674 821 - -
Gso3g2022 830 PANTHER KINESIN-LIKE PROTEIN KIN-14S 89 669 - -
Gso3g2022 830 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 152 512 IPR027417 -
Gso3g2022 830 MobiDBLite consensus disorder prediction 779 808 - -
Gso3g2022 830 ProSitePatterns Kinesin motor domain signature. 376 387 IPR019821 GO:0003777|GO:0005524|GO:0007018
Gso3g2022 830 MobiDBLite consensus disorder prediction 711 733 - -
Gso3g2022 830 MobiDBLite consensus disorder prediction 579 655 - -
Gso3g2022 830 Pfam Kinesin motor domain 158 476 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gso3g2022 830 Gene3D Kinesin motor domain 147 518 IPR036961 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g2022 Gso-Chr3 45668625 45674948 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso3g2022 118 497 Calmodulin-binding Proteins AT5G65930 42.147 4.03e-76 268
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso3g2022 K10406 - gmx:100780066 1585.85