Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g2009 ATGGGTCTTGATTCTCAGGCTCACAGCATGGTTTTTATCATTACCATATTGATATTCTTGTCATTGCAAAATGCAGCAGGAAATGAAAATCAGATTGAGACAATCTCAGGAATGGATGAGAATGAAAACAAGCAAACTCCTATAGTGGAAAACTTTAGAACTTTGCTTGGACTCAACATGTTCAACACAAGAAAGCCATGCTATAATGTTGCTGACTCTAACTTTGTGTCCCTCTCACCTTCTCTGTCACCCTACACCGAAGCTGAGGCTCTGGCTCCGGCTCCGGCTTCGGAGCTGCACGTGCACCCTCATTCCTATCACTCACATAGGAACTTGCCACTTCACAAGATTCTAAAAGAAGATAAAGGCATGGCAAAAAGAACAACAATAGTAGCTGTTGTAGTACCTGGTGGAGTTGCTACCTTAATTTGTGCACTTGGGTGTGTCTGTGTTTGCAAGAAATTCAGAAATCACAAAAGGAAACCCAATAGGACAATGCCACTCTTCAGCAAGAACGAAAGAACAGGATGTACGTCTACGTACCAAAATTCATCAAGCAATGTGAGTTTAAACTCTGCCCCTGATCTGTTTTACCTCACTTGTTTGAAACAAACTTGTGACACACAAAATAGAAGTACTTCAACCCATGATTCCCCCAAACGTACAATTTATGAGAAGAAAGTGTTGCGTAAAGAAGAATATGACAAGGCTAGCACTAGTAGCTCTTCCACAAAGGAAATTCTCTCTGTTCATGAGGATTTGGAATATCAATGTGGCAAAGCTTCATCTGGAGAAAAAACTGTCCTTCGAGGATGCCATAGCCTTCCATCAGACAACGAAAGTTTTCATTCATGTTTTGATACTCACTCATCAGTAAGTGAAACAGAAACATTGTGTCTCTCTCCTAGAAATTCAATCTCTTCAACAAATCAATTTCCTTGCCCCCCTCAGAATTCAACTACAAAGGTAAAACTAAAACCTAACCAATCGCAATCACCATGCATTCCGCAACAAGATGAACAAAAGAAGATTCAAACTTGTCAACCTAGCATTCCTCCCCCACCATGTCCACCTCCATTTTTGAAAGGAAACATTAACAGTGCAATCAAAACTCCACCTTCTCTACTTCCTCAAGGTAAGGGTGGAAGTTCTCCACTGCCAAAACTCAAACCACTTCACTGGGACAAAGTAAGAGCCACGCCAGATCGAACAATGGTGTGGGATAAGCTACGAACAAGCTCATTTGAGTTGGACGAGGTAATGATCGAGTCACTCTTTGGCTACAATTTACAAAACTCAGTGAAGAACGACGAAACAAAGAGCAAAACCCCGTCTCCTAGCAAGCATGTACTTGAGCCAAAACGGTTTCAAAACATAGCAATTCTCTCCAAAGCTCTAAATACCACAGCTGAACAAATATGCGAAGCCCTGATACTAGGGAAAGGCTTGTCTTTGGAACAACTAGAGGCACTGGTGAAAATGGTACCCACGAAGGAAGAAGAGGCTAAGCTCTTAAGCTACAAAGGAGACGTCAATGAACTAGGGTCTGCTGAAAAGTTTGTGAGAGCAATGCTTAGCGTACCATTTGCCTTTCAACGAGTGGAAACCATGCTTTACAGAGAGACTTTCGAAGATGAACTATTTCACCTCAGTAACTCTTTTTCAACGCTAGAGGAAGCGTGCAAGGAACTAAGGTCAAACAGGTTCTTCTTGAAATTGCTGGAAGCAGTGCTGAAAACAGGAAACCGCATGAACGTTGGGACAATCAGGGGAGGTGCCAGAGCCTTCAAACTCAACGCCCTTCTGAAGCTTGCTGATGTTAAAGGAACAGATGGTAAAACAACCTTGCTCCATTTCTTTGTTAAGGAGATTGTTCGCTCGGAAGGAATCAAGGCTTCAGAGAGGATCATGGGGCAGAAAAGCGAAAACAGAACGGAGGAAGAGAAGGAAGAAAATTATAAAAGAATAGGACTAGAACTTGTTTCTGATCTAAGTGCTGAGTTATGCAATGTTAAGAAGACAGCCACAATTGACTTGGATGTTCTTGCAAGCTCTATCTCAAACCTATCAAGTGGAGTGGCTAACATGCAGAACCTGGTAAAGGGTCTTTTGTGTGAGGATGAAAAGAGTGAGAGCTTTGTCATTTCTATGAAGTGGTTTCTGAACTATGCAGAGAGAAAGGTACAGGACCTGCAAGGATGTGAAGGGAGAGTCATGGCTCGTGTCAAAGAAATAACAGAGTATTTTCATGGGGATGAGAGTAAAGAAGAGTCGAATCCACTTCGAATCTTTGTGATCGTGAGGGACTTTCTGGAGATGGTAGATAATGTTTGCAATGAGCTTAAAAGGTCGTCTACGAAATCACCTCGCACCATTCGGTTACAGTAG 2388 0.4221 MGLDSQAHSMVFIITILIFLSLQNAAGNENQIETISGMDENENKQTPIVENFRTLLGLNMFNTRKPCYNVADSNFVSLSPSLSPYTEAEALAPAPASELHVHPHSYHSHRNLPLHKILKEDKGMAKRTTIVAVVVPGGVATLICALGCVCVCKKFRNHKRKPNRTMPLFSKNERTGCTSTYQNSSSNVSLNSAPDLFYLTCLKQTCDTQNRSTSTHDSPKRTIYEKKVLRKEEYDKASTSSSSTKEILSVHEDLEYQCGKASSGEKTVLRGCHSLPSDNESFHSCFDTHSSVSETETLCLSPRNSISSTNQFPCPPQNSTTKVKLKPNQSQSPCIPQQDEQKKIQTCQPSIPPPPCPPPFLKGNINSAIKTPPSLLPQGKGGSSPLPKLKPLHWDKVRATPDRTMVWDKLRTSSFELDEVMIESLFGYNLQNSVKNDETKSKTPSPSKHVLEPKRFQNIAILSKALNTTAEQICEALILGKGLSLEQLEALVKMVPTKEEEAKLLSYKGDVNELGSAEKFVRAMLSVPFAFQRVETMLYRETFEDELFHLSNSFSTLEEACKELRSNRFFLKLLEAVLKTGNRMNVGTIRGGARAFKLNALLKLADVKGTDGKTTLLHFFVKEIVRSEGIKASERIMGQKSENRTEEEKEENYKRIGLELVSDLSAELCNVKKTATIDLDVLASSISNLSSGVANMQNLVKGLLCEDEKSESFVISMKWFLNYAERKVQDLQGCEGRVMARVKEITEYFHGDESKEESNPLRIFVIVRDFLEMVDNVCNELKRSSTKSPRTIRLQ* 796
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g2009 795 Pfam Formin Homology 2 Domain 385 775 IPR015425 -
Gso3g2009 795 Gene3D Formin, FH2 domain 402 793 IPR042201 -
Gso3g2009 795 MobiDBLite consensus disorder prediction 309 335 - -
Gso3g2009 795 PANTHER FORMIN-LIKE PROTEIN 27 783 - -
Gso3g2009 795 SMART it6_source 379 789 IPR015425 -
Gso3g2009 795 SUPERFAMILY Formin homology 2 domain (FH2 domain) 352 783 - -
Gso3g2009 795 PANTHER FORMIN-RELATED 27 783 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Gso3g2009 795 ProSiteProfiles Formin homology-2 (FH2) domain profile. 379 795 IPR015425 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g2009 Gso-Chr3 45539329 45542866 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso3g2009 370 782 FH2 protein (formin) Gene Family AT3G05470 69.249 0.0 585
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso3g2009 - - gmx:100776340 1528.07
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g1972 19 48365130 48368729 Gso3g2009 3 45539329 45542866 GST
Gso3g2009 3 45539329 45542866 Gso10g1390 10 40315127 40319853 PCT