Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g1994 ATGATGATGATGACAATGGAGGGGATGATGGACAAGGGGGTGTTGGATGATGTGATAAGAAGGCTTCTGGAAGGGAAAGGAGGGAAACAGGTGCAGCTCTCTGAGTCCGAGATCCGTCAACTCTGCGTCAACGCCAGACAAATCTTCCTCTCTCAGCCAATTCTTCTCGACCTTCGTGCTCCCATCCGCGTCTGCGGTGATATACATGGTCAGTACCAGGACTTGCTGAGGCTTTTTGAATATGGTGGCTACCCTCCTGCGGCAAACTACTTGTTTCTGGGGGATTATGTGGATAGAGGGAAGCAAAGTTTGGAGACTATATGTTTGCTTTTGGCCTACAAAATAAGATATCCAGACAAAATTTATCTCTTGAGGGGAAACCATGAAGAAGCAAAGATAAACCGTATATATGGTTTTTATGATGAATGTAAAAGGAGGTTCAATGTTAGGCTATGGAAGATATTTACAGACTGCTTTAACTGTTTGCCAGTGGCTGCACTCATTGACGAGAAAATACTTTGTATGCATGGGGGACTCTCTCCAGAATTACAAAATTTAGATCAAATAAGGGAGATTCAAAGGCCTACTGAAATTCCAGATAATGGTCTCCTATGTGATCTGCTTTGGTCTGATCCTGATGCTAGCATTGAGGGCTGGGCAGAGAGTGACCGAGGAGTTTCATGTACTTTTGGAGCTGATGTAGTTGCAGAGTTTTTGGATAAAAATGACCTTGATCTTGTTTGCAGAGGGCATCAGGTTGTGGAGGATGGATATGAGTTTTTTGCTAAAAGAAGATTAGTCACGATATTTTCTGCTCCAAATTACGGTGGGGAATTTGACAATGCTGGTGCATTGTTAAGCGTTGATGATTCTCTTGTATGTTCCTTTGAGATATTGAAACCCGCTGATAGAGCTTCAGGAAGTGGTTCATCAAAAATGAATTTTAAGAAGCCACCCAAACTTGGAAAGATATAG 975 0.4256 MMMMTMEGMMDKGVLDDVIRRLLEGKGGKQVQLSESEIRQLCVNARQIFLSQPILLDLRAPIRVCGDIHGQYQDLLRLFEYGGYPPAANYLFLGDYVDRGKQSLETICLLLAYKIRYPDKIYLLRGNHEEAKINRIYGFYDECKRRFNVRLWKIFTDCFNCLPVAALIDEKILCMHGGLSPELQNLDQIREIQRPTEIPDNGLLCDLLWSDPDASIEGWAESDRGVSCTFGADVVAEFLDKNDLDLVCRGHQVVEDGYEFFAKRRLVTIFSAPNYGGEFDNAGALLSVDDSLVCSFEILKPADRASGSGSSKMNFKKPPKLGKI* 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g1994 324 MobiDBLite consensus disorder prediction 304 324 - -
Gso3g1994 324 Pfam Calcineurin-like phosphoesterase 61 253 IPR004843 GO:0016787
Gso3g1994 324 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE PP1 ISOZYME 8 2 318 - -
Gso3g1994 324 ProSitePatterns Serine/threonine specific protein phosphatases signature. 124 129 IPR006186 GO:0016787
Gso3g1994 324 SUPERFAMILY Metallo-dependent phosphatases 16 303 IPR029052 -
Gso3g1994 324 PRINTS Serine/threonine phosphatase family signature 61 88 IPR006186 GO:0016787
Gso3g1994 324 PRINTS Serine/threonine phosphatase family signature 90 117 IPR006186 GO:0016787
Gso3g1994 324 PRINTS Serine/threonine phosphatase family signature 123 147 IPR006186 GO:0016787
Gso3g1994 324 PRINTS Serine/threonine phosphatase family signature 157 183 IPR006186 GO:0016787
Gso3g1994 324 PRINTS Serine/threonine phosphatase family signature 186 213 IPR006186 GO:0016787
Gso3g1994 324 PRINTS Serine/threonine phosphatase family signature 243 263 IPR006186 GO:0016787
Gso3g1994 324 PRINTS Serine/threonine phosphatase family signature 265 281 IPR006186 GO:0016787
Gso3g1994 324 PANTHER SERINE/THREONINE PROTEIN PHOSPHATASE 2 318 - -
Gso3g1994 324 Gene3D - 8 309 IPR029052 -
Gso3g1994 324 Pfam Serine-threonine protein phosphatase N-terminal domain 15 59 IPR031675 -
Gso3g1994 324 CDD MPP_PP1_PPKL 14 301 - -
Gso3g1994 324 SMART pp2a_7 33 303 IPR006186 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g1994 Gso-Chr3 45415109 45418082 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso3g1994 56 249 Calmodulin-binding Proteins AT5G63870 32.751 1.04e-31 119
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso3g1994 K06269 - gmx:100805030 659.062
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g1958 19 48239288 48242712 Gso3g1994 3 45415109 45418082 GST