Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g1993 ATGGGAATCGATCTTAAGGCTGGGGGTAAGAGCAAAAAGACCAAAAGAACAGCACCAAAATCCAATGACATCTACCTCAAATTACTTGTCAAGCTTTATCGGTTCCTTGTTCGAAGGACTGGCAGCAATTTCAATGCTGTTATACTCAAGCGCTTGTTCATGAGCAAGGTTAACAAGCCTCCAATTTCTTTGTCAAGGTTAATTAAGTATACAAAGGGGAAGGAGGATAAAATTGCTGTAATAGTGGGGACTGTAACTGATGATATCAGAGTATATGAAGTTCCAGCATTGAAAATTACAGCACTCAAGTTTACTGAGAGAGCACGTGCAAGAATAGAAAAGGCTGGTGGTGAATGCTTGACATTTGATGAGCTTGCCCTTAGGGCTCCTTTGGGACAGAATACGGTCCTTCTTAGAGGCCCCAAGAATGCTCGGGAAGCTGTGAAACACTTTGGTCCTGCTCCTGGTGTGCCACACAGCCATACCAAGCCCTATGTACGAGCAAAGGGAAGAAAGTTCGAGAGGGCTAGAGGAAGGAGGAACAGCAGAGGATTTAGAGTTTAA 564 0.4397 MGIDLKAGGKSKKTKRTAPKSNDIYLKLLVKLYRFLVRRTGSNFNAVILKRLFMSKVNKPPISLSRLIKYTKGKEDKIAVIVGTVTDDIRVYEVPALKITALKFTERARARIEKAGGECLTFDELALRAPLGQNTVLLRGPKNAREAVKHFGPAPGVPHSHTKPYVRAKGRKFERARGRRNSRGFRV* 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g1993 187 Pfam Ribosomal protein 60S L18 and 50S L18e 2 187 IPR021131 -
Gso3g1993 187 Gene3D - 1 187 - -
Gso3g1993 187 PANTHER 60S RIBOSOMAL PROTEIN L18-1-RELATED 1 186 - -
Gso3g1993 187 PANTHER 60S RIBOSOMAL PROTEIN L18 1 186 IPR000039 GO:0003735|GO:0005840|GO:0006412
Gso3g1993 187 SUPERFAMILY Ribosomal proteins L15p and L18e 20 139 IPR036227 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g1993 Gso-Chr3 45407984 45410134 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso3g1993 3 187 Cytoplasmic Ribosomal Protein Gene Family AT2G47570 77.957 1.47e-102 291
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso3g1993 K02883 - gmx:100527681 344.354
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g1956 19 48232011 48233852 Gso3g1993 3 45407984 45410134 GST
Gso3g1993 3 45407984 45410134 Gso10g1379 10 40201341 40203369 PCT