Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g1983 ATGGGGCATTTTTCCTCAATGTTCAATGGGTTGGCACGGTCTTTTTCAATGAAGAAAGGAAGAAGGAATGGGAAATGTGGGGGGAGGGAAGCTGCTGAAGCAATGGCAAAGGAAGCTAAGAAGAATGACATGATGTTGTGTAGCTCTGGCATTGTTCATGTCGATGGTTCAAACAACTTTGCCTCCGTTTTCTCCAAAAGAGGCCAGAAAGGAGTGAACCAAGATTGCTGCATGGTGTGGGAGGAATTTGGATGCCAAGAGGACATGATATTTTGTGGGATATTTGATGGGCATGGACCATGGGGTCACTTTGTGGCCAAAAGAATAAGAGAGTCAATGCCACCATCTTTGCTATGCAACTGGCAGGAGACATTAGCCCAAACTTCAATTGATCATCCGGCTATTGATGTAGAGGAAGAGAAAAGTAAACATTACAGATTCAACATATGGAAGCATTCTTACTTGAAGACTTGTGCTGCCATTGATCAAGAACTAGAGCAATATCGCAAGATAGACTCGTTTTACAGCGGAACAACTGCCCTATCAATTGTTAGACAGGGTGAACTCATTGTCATAGCAAATGTTGGCGACTCTCGTGCTGTATTGGCTACAACATCAGATGATGGAAGTCTGGTACCAGTTCAACTAACAATCGATTTCAAGCCAAATTTACCACAGGAGGCAGAGAGAATAATTCAGTGCCAGGGGCGTGTGTTCTGCTTAGAGGACGAGCCAGGGGTGCATAGGGTGTGGTTACCGGATGAAGAGTCTCCGGGACTAGCCATGTCTAGGGCCTTTGGTGACTACTGCATCAAAGGGCATGGTCTTATTTCTGTGCCTGAGGTAACACACAGAAATATAACTAGTAGAGACCAGTTTGTTGTGCTAGCCACTGATGGGGTTTGGGATGTAATCTCTAATAAAGAAGCAGTGGATATTGTATCTTCAGCAGCAGATAAAGCTAAGGCAGCTAAACGTTTGGTGGAGTGTGCGGTGCATGCATGGAAACGCAAGAGACGGGGCATTGCCGTGGATGACATTTCAGCTATTTGTCTCTTCTTTCACTCTTCTTCCCTTTCAACAGGGCAAGTTAGCCAGGTTGCCACATTAAAATAG 1116 0.4498 MGHFSSMFNGLARSFSMKKGRRNGKCGGREAAEAMAKEAKKNDMMLCSSGIVHVDGSNNFASVFSKRGQKGVNQDCCMVWEEFGCQEDMIFCGIFDGHGPWGHFVAKRIRESMPPSLLCNWQETLAQTSIDHPAIDVEEEKSKHYRFNIWKHSYLKTCAAIDQELEQYRKIDSFYSGTTALSIVRQGELIVIANVGDSRAVLATTSDDGSLVPVQLTIDFKPNLPQEAERIIQCQGRVFCLEDEPGVHRVWLPDEESPGLAMSRAFGDYCIKGHGLISVPEVTHRNITSRDQFVVLATDGVWDVISNKEAVDIVSSAADKAKAAKRLVECAVHAWKRKRRGIAVDDISAICLFFHSSSLSTGQVSQVATLK* 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g1983 371 SMART PP2C_4 51 352 IPR001932 -
Gso3g1983 371 PANTHER ALPHABET, ISOFORM E-RELATED 1 361 - -
Gso3g1983 371 PANTHER CATALYTIC/PROTEIN PHOSPHATASE TYPE 2C 1 361 - -
Gso3g1983 371 Pfam Protein phosphatase 2C 85 332 IPR001932 -
Gso3g1983 371 CDD PP2Cc 59 354 IPR001932 -
Gso3g1983 371 ProSiteProfiles PPM-type phosphatase domain profile. 60 354 IPR001932 -
Gso3g1983 371 SUPERFAMILY PP2C-like 56 355 IPR036457 -
Gso3g1983 371 Gene3D - 52 357 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g1983 Gso-Chr3 45337650 45341073 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso3g1983 1 355 PP2C-type Phosphatase Gene Family AT3G05640 72.269 0.0 550
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso3g1983 - - gmx:100801309 742.265
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g1943 19 48129666 48133030 Gso3g1983 3 45337650 45341073 GST
Gso3g1983 3 45337650 45341073 Gso10g1373 10 40145513 40148944 PCT
Gso10g1373 10 40145513 40148944 Gso3g1983 3 45337650 45341073 PCT