Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g1981 ATGAGTAGGATTGAATTATCGAGGGCGAAGTCAGCGCCGGTTCCATTGGGGACTCTGATTGGCCGTGAGCTTCGAAATGGAAAAGTTGAAAAACCTTTTGTGAAGTATGGACAATCTGGATTGGCCAAGAAAGGAGAAGATTACTTTCTGATCAAGACAGATTGCCTCAGGGTTCCTGGGGATGCATCAACGGCTTTTTCTGTCTTTGCGGTCTTTGATGGGCATAACGGTATATCAGCTGCTATTTTTGCAAAGGAAAACTTGCTAAGTAATGTTTTGAGTGCAATACCACAAGATATTAGCAGGGATGCTTGGCTTCAGGCTCTTCCTCGTGCTCTGGTTGTTGGTTTTGTGAAGACTGACATAGAGTTTCAGCAAAAGGGGGAAACTTCTGGAACAACAGCTACATTTGTTTTGGTTGATGGATGGACTGTCACTGTTGCATCTGTTGGGGATTCCCGCTGCATATCAGATACTCAGGGAGGTGTAGTTTCTCTCTTGACAGTTGATCACAGACTGGAAGAGAATGCAGAAGAGAGGGAGCGTGTTACTGCCAGCGGTGGTGAAGTAGGAAGACTCAATGTATTTGGAGGCAATGAGGTTGGGCCTCTTCGCTGCTGGCCAGGTGGATTGTGCCTATCCAGATCAATAGGCGACACGGATGTGGGAGAATTTATTGTGCCAATACCACATGTAAAGCAAGTGAAGCTTTCCAATGTTGGTGGAAGGCTTATTATAGCTTCTGATGGTATTTGGGATGCTTTATCATCCGATATGGCTGCTAAGTCTTGTCGAGGTCTACCTGCAGAGCTTGCTGCAAAACTAGTGGTTAAGGAAGCTCTAAGGTCAAGAGGCCTTAAGGATGATACAACCTGCCTTGTTGTAGATATTATTCCTTCGGACCTCCCTGTATTACCACCGATTCCAAGAAAGAAACATAATATGCTAACTTCGCTTCTATTTTTTGGAAAGAAATCTGAGAACTCTGTGAACAAAGCTACCAATAAGCTTTCTGCAGTTGGTGTTGTGGAGGAGTTATTTGAAGAGGGTTCTGCAATGCTTACCGAAAGGCTAGGTAAGGATTTTCCGCTTAATAAAAATTCTGGTATTTTCCGTTGTGCGGTTTGCCAAGTGGACCAACCCCCTGGTGATGATGGTTTATCAGTGAACTCTGGGCCTTTTTTCTCTCCAGCATCTAGTCCATTCCTCTGCACAAACTGTCAGAAGAAGAAAGATGCCATGGAAGGAAAAAGGCCTAGCAGAGCCTCCATTACAGCATAG 1281 0.4473 MSRIELSRAKSAPVPLGTLIGRELRNGKVEKPFVKYGQSGLAKKGEDYFLIKTDCLRVPGDASTAFSVFAVFDGHNGISAAIFAKENLLSNVLSAIPQDISRDAWLQALPRALVVGFVKTDIEFQQKGETSGTTATFVLVDGWTVTVASVGDSRCISDTQGGVVSLLTVDHRLEENAEERERVTASGGEVGRLNVFGGNEVGPLRCWPGGLCLSRSIGDTDVGEFIVPIPHVKQVKLSNVGGRLIIASDGIWDALSSDMAAKSCRGLPAELAAKLVVKEALRSRGLKDDTTCLVVDIIPSDLPVLPPIPRKKHNMLTSLLFFGKKSENSVNKATNKLSAVGVVEELFEEGSAMLTERLGKDFPLNKNSGIFRCAVCQVDQPPGDDGLSVNSGPFFSPASSPFLCTNCQKKKDAMEGKRPSRASITA* 427
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g1981 426 PANTHER ALPHABET, ISOFORM E-RELATED 2 425 - -
Gso3g1981 426 CDD PP2Cc 43 297 IPR001932 -
Gso3g1981 426 PANTHER PROTEIN PHOSPHATASE 2C 5-RELATED 2 425 - -
Gso3g1981 426 Gene3D - 33 301 IPR036457 -
Gso3g1981 426 SMART PP2C_SIG_2 50 297 IPR001932 -
Gso3g1981 426 SMART PP2C_4 23 295 IPR001932 -
Gso3g1981 426 Pfam Protein phosphatase 2C 63 280 IPR001932 -
Gso3g1981 426 ProSiteProfiles PPM-type phosphatase domain profile. 25 297 IPR001932 -
Gso3g1981 426 SUPERFAMILY PP2C-like 39 297 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g1981 Gso-Chr3 45308013 45311712 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso3g1981 1 425 PP2C-type Phosphatase Gene Family AT1G09160 75.758 0.0 639
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso3g1981 - - gmx:100800232 835.484
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g1941 19 48092601 48095725 Gso3g1981 3 45308013 45311712 GST