Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g1977 ATGGATCGGGAAGGAGGATCCAACGCCGGATCTTGCTACTACTCCGTTCTCGGGATTCGTAGGGATGCCTCCTTCTCTGATATTCGCACTGCCTACCGCAAACTCGCTATGAGGTGGCACCCGGACAAGTGGGCTCTGAATCCCGCAACCGCCGGCGAAGCCAAGCGCCGGTTTCAGCAAATCCAAGAAGCCTACTCAGTTCTCTCCGATCAGTCTAAAAGGTCAATGTACGATGCGGGGCTCTACGATCCTTTGGAGGAAGAAGACCAAGATTTTTGTGACTTCATGCAAGAGATGATCTCGATGATGAACAATGTGAAAGACGAGGGGGACAGTTTGGAGGACCTACAGAGGATGTTCGTGGATATGGTGGGGGGAGATCATGGCCATGGAATCGGCGTTGACTTGAACCAAGATCGAACGGCTGGAAAGCGAGGACGAGTATATGGATCGAAGGGCAACGCGCCCAAGCGCAGCAACTCTCGCAGTTAG 492 0.5325 MDREGGSNAGSCYYSVLGIRRDASFSDIRTAYRKLAMRWHPDKWALNPATAGEAKRRFQQIQEAYSVLSDQSKRSMYDAGLYDPLEEEDQDFCDFMQEMISMMNNVKDEGDSLEDLQRMFVDMVGGDHGHGIGVDLNQDRTAGKRGRVYGSKGNAPKRSNSRS* 164
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g1977 163 PANTHER PUTATIVE, EXPRESSED-RELATED 8 142 - -
Gso3g1977 163 SUPERFAMILY Chaperone J-domain 12 85 IPR036869 -
Gso3g1977 163 PRINTS DnaJ domain signature 14 32 IPR001623 -
Gso3g1977 163 PRINTS DnaJ domain signature 32 47 IPR001623 -
Gso3g1977 163 PRINTS DnaJ domain signature 53 73 IPR001623 -
Gso3g1977 163 PANTHER PUTATIVE, EXPRESSED-RELATED 8 142 - -
Gso3g1977 163 SMART dnaj_3 11 73 IPR001623 -
Gso3g1977 163 ProSitePatterns Nt-dnaJ domain signature. 58 77 IPR018253 -
Gso3g1977 163 Pfam DnaJ domain 13 78 IPR001623 -
Gso3g1977 163 Gene3D DnaJ domain 2 103 IPR036869 -
Gso3g1977 163 MobiDBLite consensus disorder prediction 131 163 - -
Gso3g1977 163 ProSiteProfiles dnaJ domain profile. 12 81 IPR001623 -
Gso3g1977 163 CDD DnaJ 12 70 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g1977 Gso-Chr3 45275324 45276656 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso3g1977 12 79 C2H2 Transcription Factor Family AT1G74250 43.478 2.75e-13 64.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso3g1977 - - gmx:100798656 328.176
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g1936 19 48058070 48059451 Gso3g1977 3 45275324 45276656 GST