Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g1976 ATGGAATATTCAAAAAGACAATCTCAGCAGGAGGGCACTGATGATCAAAAGGGTATTCAAATTCGTGGTCAAGATTCAAAGCGAAGACGTGAAGATTCACAACAATCGGATACCCTCCGTATCATTAGTTTAAGGTCTCTAGTTCACATAACGAATGACGACATCGCGCGGTACATGAAAGACTTAGTCCAAAGATTGGTACGAGAGGAGTTGGCGGAATGCAAACTTCCAAGACCAATTAATAATAATCAGATTGGAATATCGGGAAGCAAACCCTTTCGACTGGTTTTTAAGAATGAATTGCCTGATACAATTTATACTAACTCCAAGATCAAAGCAAAAGGCAACACTCCTCTTGAGGTTGTTCTTTTTGATATTGAATCTAAGTCTATAGTCGCCGAGGGTTCACTGTCTTCAATCAAGATAGAAATTTGTGTCCTTGATGGTGAGTTCTGTTCAATAAATGGGCGTGAAGATTGGAGCGAAGATGAATTTAATGCCAAAATCGTACGTCAAAGAGACAATAAAGGGCGGTTACTGAAAGGAGATACGATTATTACACTTGAAAATGGAGTTGGTTATATCACCAACCTTGAGTTCACTGACAACTCAAGCTGGAGAAGAACCCGATGCTTCAGCTTAGGAGCCAAGTTGTTGCAATCAAATCTGAAAGACGCAATTAACATCAGGGAAGGTAGAACCAAACCTTTTATTGCCAAGGATTTCAGAGGAGAGAAAAATCAGAAACGCGACACTCCTTCCCTCAATGATGAAACATGGCGTTTGAAACATATATCAAAAAACGTTTATCGGCGGCTGCTTAAGCACGGGATAAAAACAGTTGGGGATCTGTTGAAGGAGAATGAAACCAATCCATCATCTTTGCAAGAGAAATTTGGCAAGATTTCAAAAAAGAAACAGGAAGAAATTATTAAGCTTGCTAAGAAAGCAAAGTATGCCAAGACTTGCGTTGCTGAAGCCACATTTGATGGACAAAATTATCATTCAGAGAAGAATACTCTCATCTCCAACCAGAGGGAAGCTTACAAAAATTTGAAGGATCCGGTACCAATTGAGACAATAACACATGAGTTAGTGAAAACATTGACACCAGTTAATGCACAATATTACAGTGCTCCAAATCAAGATGTGCAACAGCTTGACTTTTCAATTGCTCAGCAAGAAGAAATTTCTAGACTAAACTGGTCAGCAGGGGGGCAGATTGTTGATGGATACATATTATCACAGATTGATGATGAAAACGTAAGTAATTTCTTACCTGAGATAAATTCTGAATTCATCTTTCCCTATGGTGATGAAGCAGAATATTGCAATAGTTCCTCTTTTCCCAACTCCGCGTTGAATATATCAGACAAAGGGAAAAGCAAGATGGTTTGA 1398 0.3891 MEYSKRQSQQEGTDDQKGIQIRGQDSKRRREDSQQSDTLRIISLRSLVHITNDDIARYMKDLVQRLVREELAECKLPRPINNNQIGISGSKPFRLVFKNELPDTIYTNSKIKAKGNTPLEVVLFDIESKSIVAEGSLSSIKIEICVLDGEFCSINGREDWSEDEFNAKIVRQRDNKGRLLKGDTIITLENGVGYITNLEFTDNSSWRRTRCFSLGAKLLQSNLKDAINIREGRTKPFIAKDFRGEKNQKRDTPSLNDETWRLKHISKNVYRRLLKHGIKTVGDLLKENETNPSSLQEKFGKISKKKQEEIIKLAKKAKYAKTCVAEATFDGQNYHSEKNTLISNQREAYKNLKDPVPIETITHELVKTLTPVNAQYYSAPNQDVQQLDFSIAQQEEISRLNWSAGGQIVDGYILSQIDDENVSNFLPEINSEFIFPYGDEAEYCNSSSFPNSALNISDKGKSKMV* 466
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g1976 465 MobiDBLite consensus disorder prediction 1 35 - -
Gso3g1976 465 Pfam Calmodulin binding protein central domain 254 316 IPR046830 -
Gso3g1976 465 PANTHER OS02G0177800 PROTEIN 5 415 IPR012416 GO:0005516
Gso3g1976 465 PANTHER CALMODULIN-BINDING PROTEIN 5 415 - -
Gso3g1976 465 Pfam Calmodulin binding protein-like N-terminal domain 93 241 IPR046831 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g1976 Gso-Chr3 45268327 45274392 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso3g1976 59 324 Calmodulin-binding Proteins AT5G57580 35.484 1.56e-42 157
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso3g1976 - - gsj:114407556 897.886
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g1935 19 48044074 48052038 Gso3g1976 3 45268327 45274392 GST